Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 LINC00888-204ENST00000487386 421 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC138853.1-201ENST00000503549 823 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RAC1P2-201ENST00000511164 579 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 NPM1P41-201ENST00000512920 831 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RNU2-27P-201ENST00000516185 142 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RN7SKP258-201ENST00000517151 304 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 DEFB108A-201ENST00000530110 222 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 CR383656.6-201ENST00000550518 394 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 GTF2IP22-201ENST00000554443 182 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC068135.2-201ENST00000569293 1028 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 RN7SL600P-201ENST00000581811 299 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 VN1R90P-201ENST00000595717 726 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC136601.2-201ENST00000604356 474 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 MIR7703-201ENST00000620784 77 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 AC112204.3-201ENST00000623822 332 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 MTND5P7-201ENST00000413558 1798 ntBASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01561Q8N1V8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 RN7SKP280-201ENST00000364196 304 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 SNORA3.3-201ENST00000408712 125 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 RPL7P8-201ENST00000411964 730 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC007919.1-201ENST00000429380 217 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 Z74696.2-201ENST00000436514 498 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 GAPDHP27-201ENST00000447427 1020 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC093392.2-201ENST00000450682 337 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 MRPS31P2-201ENST00000451581 518 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 NDUFA12P1-201ENST00000455914 406 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 RPL35AP28-201ENST00000459730 331 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC072039.1-201ENST00000477611 581 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 FTH1P21-201ENST00000512179 511 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 RN7SKP287-201ENST00000516546 266 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 RNU6-201P-201ENST00000517100 61 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC007115.1-201ENST00000546853 234 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC123904.3-201ENST00000547218 814 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC015726.1-201ENST00000602353 681 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AC093424.1-201ENST00000604999 338 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 FTX_3.1-201ENST00000610451 147 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 AL732618.1-201ENST00000623251 301 ntBASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01561Q8N1V8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 SNORA62-201ENST00000365493 153 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 RNU6-140P-201ENST00000384566 108 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 OR6C69P-201ENST00000394268 893 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 SNORA11B-201ENST00000408175 129 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms