Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.59□□□□□ -1.51
SIX5Q8N196 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 DEFB109C-201ENST00000382575 264 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 DEFB109B-201ENST00000382656 264 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 RNU6-842P-201ENST00000384269 107 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AL009179.1-201ENST00000406085 265 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 RNA5SP487-201ENST00000410186 122 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 MRPS18CP6-201ENST00000423587 223 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.59□□□□□ -1.51
SIX5Q8N196 AL590399.2-201ENST00000427536 309 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 HMGB1P9-201ENST00000429856 646 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC073063.1-201ENST00000434352 607 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.59□□□□□ -1.51
SIX5Q8N196 HSFY6P-201ENST00000445573 403 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 PTMAP3-201ENST00000447474 330 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AL353752.1-201ENST00000454946 260 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC009127.1-201ENST00000467090 155 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 RPS23P3-201ENST00000470993 430 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 RN7SL481P-201ENST00000477764 299 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.59□□□□□ -1.51
SIX5Q8N196 SNORA31.3-201ENST00000516029 96 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 RNU6-388P-201ENST00000517012 105 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 RNU6-389P-201ENST00000517048 105 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.59□□□□□ -1.51
SIX5Q8N196 AC131281.1-201ENST00000522984 164 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.59□□□□□ -1.51
SIX5Q8N196 SUB1P3-201ENST00000564581 315 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
SIX5Q8N196 AL162431.4-201ENST00000604674 411 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 NANOGP3-201ENST00000605855 286 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 HMGN2P28-201ENST00000606102 262 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 AC090971.4-201ENST00000560291 1800 ntBASIC5.59□□□□□ -1.51
SIX5Q8N196 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SIX5Q8N196 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.59□□□□□ -1.51
SIX5Q8N196 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIX5Q8N196 Z95114.1-201ENST00000624264 14574 ntBASIC5.59□□□□□ -1.52
SIX5Q8N196 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SIX5Q8N196 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SIX5Q8N196 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SIX5Q8N196 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX5Q8N196 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX5Q8N196 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.58□□□□□ -1.52
SIX5Q8N196 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 Y_RNA.307-201ENST00000365022 117 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 RNA5SP187-201ENST00000384400 119 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 RNU6-790P-201ENST00000384479 105 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 MIR192-201ENST00000384915 110 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC097374.1-203ENST00000400783 485 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC096921.1-201ENST00000411661 375 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC011933.1-201ENST00000413334 321 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX5Q8N196 AL356968.1-201ENST00000416622 474 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX5Q8N196 C4BPAP2-201ENST00000428434 478 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX5Q8N196 PCNPP5-201ENST00000452246 481 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC112492.4-201ENST00000456549 352 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 RPL22P13-201ENST00000493291 347 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 SLC25A15P5-201ENST00000508033 253 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 Y_RNA.668-201ENST00000516233 93 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 RNY3P15-201ENST00000516297 97 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC008489.1-201ENST00000524271 483 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC022882.1-201ENST00000532142 501 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX5Q8N196 RN7SL652P-201ENST00000577769 300 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 MIR548AC-201ENST00000585049 88 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 AC005357.1-201ENST00000588399 301 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 OR1M4P-201ENST00000589199 287 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.58□□□□□ -1.52
SIX5Q8N196 EIF3FP1-201ENST00000613970 806 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 MIR7641-1-201ENST00000627518 61 ntBASIC5.58□□□□□ -1.52
SIX5Q8N196 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SIX5Q8N196 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX5Q8N196 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX5Q8N196 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX5Q8N196 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX5Q8N196 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms