Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC079355.1-201ENST00000421770 223 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 RPS15AP10-201ENST00000432472 382 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AL354714.3-201ENST00000447284 493 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 RPL10P17-201ENST00000453852 316 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC097484.1-201ENST00000471148 389 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 RN7SL30P-201ENST00000488416 306 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AL390726.5-202ENST00000564800 256 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 IGHV3-29-201ENST00000604817 344 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AL021879.1-201ENST00000611756 288 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 AC032011.1-201ENST00000611703 1549 ntBASIC6.04□□□□□ -1.44
RNF20Q5VTR2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF20Q5VTR2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AP000756.2-201ENST00000624168 2567 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 Y_RNA.106-201ENST00000363189 100 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 Y_RNA.380-201ENST00000365663 111 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU6-701P-201ENST00000384059 107 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU6-713P-201ENST00000384761 107 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU2-50P-201ENST00000410494 143 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU6-55P-201ENST00000411092 107 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC239809.1-201ENST00000450470 217 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 CYCSP34-201ENST00000458172 304 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC072052.1-201ENST00000496556 306 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 SNRPCP2-201ENST00000504370 475 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC010350.1-201ENST00000504908 231 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC096745.1-201ENST00000509945 370 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 MTCO3P44-201ENST00000510977 541 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RFPL4AP5-201ENST00000514977 504 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU6-475P-201ENST00000516073 104 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RNU2-53P-201ENST00000516257 147 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 HMGN1P28-201ENST00000521340 364 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC025423.5-201ENST00000550230 219 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC007375.1-201ENST00000554513 578 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 HMGB3P26-201ENST00000560051 582 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL670379.6-201ENST00000603753 252 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL670379.1-201ENST00000604752 252 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL670379.5-201ENST00000605253 252 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL670379.8-201ENST00000605353 252 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL670379.7-201ENST00000605823 252 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC022467.1-201ENST00000614738 749 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AL161637.1-201ENST00000622380 412 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 PABPC1P6-201ENST00000445594 1829 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 AC100778.3-201ENST00000580060 1750 ntBASIC6.03□□□□□ -1.44
RNF20Q5VTR2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF20Q5VTR2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
RNF20Q5VTR2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.02□□□□□ -1.44
RNF20Q5VTR2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC011978.2-201ENST00000569835 2054 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 RNU6-754P-201ENST00000391166 107 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 SNORA77-201ENST00000408716 125 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC096664.2-201ENST00000411843 406 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC011933.1-201ENST00000413334 321 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 BX323845.1-201ENST00000432417 179 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 RPS29P9-201ENST00000440360 171 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 PPIAP20-201ENST00000449839 135 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC112492.4-201ENST00000456549 352 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC026979.1-201ENST00000492525 396 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms