Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MCTS2P-201ENST00000394552 546 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.48□□□□□ -2.17
RIF1Q5UIP0 USP9YP10-201ENST00000454868 628 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 AC090255.1-201ENST00000495779 349 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 RPS26P24-201ENST00000497656 331 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 SNORA70.14-201ENST00000516205 110 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.48□□□□□ -2.17
RIF1Q5UIP0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RIF1Q5UIP0 AC068944.2-201ENST00000610373 403 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 AC243773.3-201ENST00000613270 256 ntBASIC1.48□□□□□ -2.17
RIF1Q5UIP0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
RIF1Q5UIP0 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 HMGB3P15-201ENST00000507326 574 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 NPM1P52-201ENST00000518264 846 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 RPS12P24-201ENST00000412619 387 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AC079776.3-201ENST00000450665 370 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 OR7L1P-201ENST00000456181 380 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 SNRPFP3-201ENST00000457792 225 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AC090071.1-201ENST00000507713 644 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AC008885.2-201ENST00000509506 930 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 MAGOH2P-202ENST00000584384 429 ntBASIC1.47□□□□□ -2.17
RIF1Q5UIP0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RIF1Q5UIP0 MIR216A-201ENST00000385063 110 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 RPL31P41-201ENST00000477967 372 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AL137072.1-201ENST00000603444 466 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AL627230.5-201ENST00000619807 58 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 MTND4P1-201ENST00000457501 1466 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC098934.3-201ENST00000430450 190 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 SETP8-201ENST00000435341 628 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AL590664.1-201ENST00000448065 339 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 RPL7P5-201ENST00000471472 736 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC004486.1-201ENST00000546846 233 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC007229.1-201ENST00000590455 412 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 BNIP3P4-201ENST00000604946 565 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC107294.3-201ENST00000609211 526 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 MIR6788-201ENST00000618842 66 ntBASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
RIF1Q5UIP0 AC010329.2-201ENST00000595195 2737 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 SNORA26.7-201ENST00000391288 122 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 EBAG9P1-201ENST00000418955 543 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 RPS3AP44-201ENST00000425466 790 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 AC234781.2-201ENST00000426370 994 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 GOLGA5P1-201ENST00000507317 980 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 SNORA50A-202ENST00000629536 136 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 RNA5SP27-201ENST00000363839 119 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 U3.37-201ENST00000408528 213 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 MTCYBP45-201ENST00000435243 565 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 HMGB1P45-201ENST00000435986 653 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.45□□□□□ -2.18
RIF1Q5UIP0 RNU1-40P-201ENST00000516816 164 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 RNU1-97P-201ENST00000516872 164 ntBASIC1.45□□□□□ -2.18
RIF1Q5UIP0 DDX43P2-201ENST00000604753 1354 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 RNU6-984P-201ENST00000363236 109 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 HMGN2P19-201ENST00000425149 265 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 HMGN2P18-201ENST00000450680 270 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 MIR1273G-201ENST00000577677 100 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 KATNBL1P1-201ENST00000605192 748 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 uc_338.12-201ENST00000616344 181 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AC098679.5-201ENST00000624394 571 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AC093084.1-201ENST00000424233 687 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AL445687.1-201ENST00000439946 251 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 AL691517.1-201ENST00000440833 1235 ntBASIC1.44□□□□□ -2.18
RIF1Q5UIP0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms