Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 MTCYBP1-201ENST00000454315 1119 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC026410.2-201ENST00000460281 156 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL136126.1-201ENST00000473603 402 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC092451.1-201ENST00000480211 153 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC096751.1-202ENST00000502691 1067 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC107401.1-201ENST00000503426 685 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 CDC42P4-201ENST00000510507 563 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 MTND1P5-201ENST00000517906 940 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AP004247.1-201ENST00000531556 1289 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC091805.2-201ENST00000603848 235 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL162713.1-201ENST00000604480 262 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC108747.1-201ENST00000609508 535 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 MIR4496-201ENST00000635896 61 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL022578.1-201ENST00000439330 1433 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 SAGE4P-201ENST00000442271 3381 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RNU5E-5P-201ENST00000365379 116 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 MIR320C1-201ENST00000408566 88 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC069218.2-201ENST00000411665 344 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 ELOCP17-201ENST00000414751 326 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RPS3AP9-201ENST00000417027 792 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 OFD1P18Y-201ENST00000420889 959 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC005326.1-201ENST00000429197 123 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RPL37P21-201ENST00000435890 276 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 GDI2P2-201ENST00000445131 608 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC008264.1-201ENST00000447612 367 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RPL23AP67-201ENST00000465341 474 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC093809.1-201ENST00000509155 340 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 OR6C73P-201ENST00000546432 358 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC005476.1-201ENST00000554427 397 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 HSPE1P3-201ENST00000559254 309 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 PRELID3BP8-201ENST00000604148 295 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC113194.1-201ENST00000606037 500 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC098614.4-201ENST00000607601 462 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC087241.4-201ENST00000612441 480 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC068722.2-201ENST00000618734 544 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC093591.3-201ENST00000634516 308 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 GABPAP-201ENST00000419271 1356 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 Z83843.1-201ENST00000604070 3685 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 AC092447.7-201ENST00000422212 1621 ntBASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TTC39AQ5SRH9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 HMGB1P17-201ENST00000403495 628 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RNU2-21P-201ENST00000410368 188 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RNA5SP120-201ENST00000410900 112 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC126124.2-201ENST00000413542 321 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RPL30P2-201ENST00000414021 291 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 UBE2V1P10-201ENST00000414685 269 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms