Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNU6-39P-201ENST00000384344 107 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RNU6-1158P-201ENST00000391167 107 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC068050.1-201ENST00000394891 380 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RNU6-908P-201ENST00000410160 94 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RNU2-9P-201ENST00000410194 145 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RN7SKP159-201ENST00000410657 292 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RPL23AP26-201ENST00000412728 464 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL109913.1-201ENST00000421173 514 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL139413.1-201ENST00000421309 217 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC244098.2-201ENST00000422068 99 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 OR2AS1P-201ENST00000427827 319 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 MED13P1-201ENST00000428342 171 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL606489.2-201ENST00000433886 234 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 DDX3P2-201ENST00000446138 111 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RNU6-261P-201ENST00000459506 102 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RPS23P7-201ENST00000466210 444 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RPS29P25-201ENST00000481709 171 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC091167.1-201ENST00000492017 396 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC026801.2-201ENST00000515352 425 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 NRON-201ENST00000517270 370 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC100870.1-201ENST00000522035 505 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 FAM60DP-201ENST00000524174 632 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL121579.1-201ENST00000555129 305 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 MIR3939-201ENST00000582614 106 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 XIAPP1-201ENST00000603162 600 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AC010680.3-201ENST00000604215 520 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL034351.1-201ENST00000605288 668 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 ARF4P1-201ENST00000605447 541 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL020991.1-201ENST00000612314 373 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 TUG1_2.1-201ENST00000614234 87 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 AL445567.2-201ENST00000618935 498 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 MIR6830-201ENST00000636015 70 ntBASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
KHDC1Q4VXA5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 CKAP2P1-201ENST00000555477 2049 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 Y_RNA.22-201ENST00000362492 102 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 Y_RNA.38-201ENST00000362617 102 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RNU1-14P-201ENST00000362759 152 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 Y_RNA.303-201ENST00000364998 94 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RNU6-606P-201ENST00000384721 111 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 UBE2FP1-201ENST00000416536 447 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 NEK4P1-201ENST00000433383 879 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 BNIP3P2-201ENST00000441221 577 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 CALM1P1-201ENST00000442082 433 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AL356010.1-201ENST00000456364 102 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC010618.1-201ENST00000469924 477 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC104164.2-201ENST00000496953 495 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC108475.1-201ENST00000507880 950 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RN7SKP122-201ENST00000515923 296 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 SNORA40.12-201ENST00000516329 111 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 RNU6-835P-201ENST00000516974 104 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC123904.3-201ENST00000547218 814 ntBASIC4.23□□□□□ -1.73
KHDC1Q4VXA5 AC034105.3-201ENST00000565294 442 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms