Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.9□□□□□ -2.1
CCDC58Q4VC31 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 ANKRD36P1-201ENST00000344424 659 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 MTCO1P39-201ENST00000426148 480 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AL118520.1-201ENST00000450770 291 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 MTCO2P9-201ENST00000503214 694 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AC092470.1-201ENST00000546187 132 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 MED28P6-201ENST00000558776 231 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 HMGB1P6-201ENST00000569046 646 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AC022662.1-201ENST00000580252 331 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AC011471.1-201ENST00000585766 187 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AL450336.1-201ENST00000605180 586 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
CCDC58Q4VC31 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC58Q4VC31 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 RNU6-98P-201ENST00000384173 107 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL591719.1-201ENST00000444669 744 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 ATG12P2-201ENST00000456830 416 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 OR5H5P-201ENST00000503164 928 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC016550.3-201ENST00000515706 767 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 RNA5SP356-201ENST00000515972 94 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC023158.1-201ENST00000561632 1025 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 FAM60BP-201ENST00000578364 658 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 OR4K7P-201ENST00000580232 945 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC135803.1-201ENST00000608748 565 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 MIR7106-201ENST00000612419 65 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL450472.3-201ENST00000615578 367 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AL590410.1-201ENST00000617925 333 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AP006248.3-201ENST00000623580 594 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC58Q4VC31 AC009487.4-201ENST00000624969 3585 ntBASIC1.89□□□□□ -2.11
CCDC58Q4VC31 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 GNG5P1-201ENST00000255500 204 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MIR23B-201ENST00000384832 97 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MIR128-1-201ENST00000384921 82 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC099677.1-201ENST00000420575 175 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 RPL36P19-201ENST00000430744 301 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MTATP6P7-201ENST00000453315 681 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC114982.2-201ENST00000461396 358 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MTCYBP17-201ENST00000503579 789 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 RNU4-29P-201ENST00000515943 174 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 SNORA70.24-201ENST00000517233 118 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AP005902.1-201ENST00000521358 186 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 DUXAP9-208ENST00000622815 614 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC58Q4VC31 MIR7515-201ENST00000637837 67 ntBASIC1.88□□□□□ -2.11
CCDC58Q4VC31 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 NDUFB4P4-201ENST00000404822 243 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 ATF1P1-201ENST00000406040 927 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 RNU6-712P-201ENST00000410558 100 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC098614.2-201ENST00000426040 255 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC108938.1-201ENST00000451204 136 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms