Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL353796.1-201ENST00000561542 3241 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC015813.6-201ENST00000624409 5808 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC007159.1-201ENST00000566529 4706 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC107081.3-201ENST00000612715 2034 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL022323.4-201ENST00000623980 13120 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNU6-1255P-201ENST00000363434 112 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNY4P28-201ENST00000365281 93 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.343-201ENST00000365354 112 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNU6-596P-201ENST00000365395 98 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNU6-658P-201ENST00000384606 106 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RPS29P13-201ENST00000402041 169 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL024474.1-201ENST00000404655 591 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC008267.6-201ENST00000441664 139 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RAC1P7-201ENST00000445367 377 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RPL23AP15-201ENST00000450202 459 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RPL12P39-201ENST00000455456 496 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC108078.2-201ENST00000510750 236 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNU2-69P-201ENST00000516061 100 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.687-201ENST00000516558 91 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RNU6-685P-201ENST00000517088 95 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 FAM60DP-201ENST00000524174 632 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 RANP3-201ENST00000530970 276 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 MIR4300-201ENST00000581016 96 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL356218.2-201ENST00000605264 187 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC005520.5-201ENST00000613926 164 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL359547.2-201ENST00000615810 418 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC241377.1-201ENST00000619797 406 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AL360270.2-201ENST00000562952 5985 ntBASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC009643.2-201ENST00000603543 1448 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.233-201ENST00000364407 101 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 SNORA70.9-201ENST00000384370 135 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RNU6-434P-201ENST00000384376 107 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.541-201ENST00000384640 113 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RN7SKP222-201ENST00000410651 315 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RPL23AP36-201ENST00000413895 458 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 EI24P4-201ENST00000423683 1078 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 UBE2V1P4-201ENST00000425374 344 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RPS26P40-201ENST00000435209 294 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 Z95327.1-201ENST00000446082 482 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 KNOP1P3-201ENST00000446933 426 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC016696.1-201ENST00000446949 318 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RBMY2TP-201ENST00000451162 947 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC005229.2-201ENST00000456995 399 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC114982.1-201ENST00000469402 321 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC010618.1-201ENST00000469924 477 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC092754.1-201ENST00000472975 479 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 RBBP4P6-201ENST00000508098 202 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC074133.1-201ENST00000515696 183 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MRPS21P9-201ENST00000571150 257 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC022884.3-201ENST00000579571 248 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC008521.1-201ENST00000587471 187 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC007619.2-201ENST00000605743 379 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC023813.4-201ENST00000607580 580 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MIR6716-201ENST00000613413 80 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AC034229.5-201ENST00000624258 185 ntBASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms