Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLPPQ16740 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPPQ16740 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLPPQ16740 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
CLPPQ16740 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 OR5H2-201ENST00000355273 945 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLPPQ16740 RNA5SP374-201ENST00000362939 125 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLPPQ16740 RPL23AP29-201ENST00000397284 453 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 UBA52P6-201ENST00000399822 382 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 RNU2-47P-201ENST00000410649 186 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 SSR1P2-201ENST00000415208 787 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AL137014.1-201ENST00000420490 1226 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 MTCO1P39-201ENST00000426148 480 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AC079780.1-201ENST00000428259 207 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.16□□□□□ -1.9
CLPPQ16740 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.16□□□□□ -1.9
CLPPQ16740 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.16□□□□□ -1.9
CLPPQ16740 USP9YP25-201ENST00000457708 443 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 AC021146.8-201ENST00000507455 733 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 FABP5P12-201ENST00000515543 389 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 RNU6-311P-201ENST00000516224 102 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 RNU6-415P-201ENST00000516252 97 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.16□□□□□ -1.9
CLPPQ16740 SNRPGP16-201ENST00000533275 226 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 CR383656.7-201ENST00000548164 174 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 MTND4P33-201ENST00000556706 766 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.16□□□□□ -1.9
CLPPQ16740 AL353743.1-202ENST00000431724 1695 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPPQ16740 AP000776.1-201ENST00000530032 1663 ntBASIC3.16□□□□□ -1.9
CLPPQ16740 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.16□□□□□ -1.9
CLPPQ16740 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLPPQ16740 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CLPPQ16740 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLPPQ16740 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.15□□□□□ -1.9
CLPPQ16740 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.15□□□□□ -1.9
CLPPQ16740 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLPPQ16740 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPPQ16740 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLPPQ16740 RNA5SP197-201ENST00000363357 119 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RNU6-799P-201ENST00000363567 107 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RNU1-140P-201ENST00000365040 165 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RAP1BP1-201ENST00000412709 553 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AC007899.1-201ENST00000412776 775 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLPPQ16740 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 AL139421.1-201ENST00000423010 169 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 MTCO2P20-201ENST00000437339 673 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 SDCBPP1-201ENST00000440192 890 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPPQ16740 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 RPS3AP14-201ENST00000483907 780 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.15□□□□□ -1.91
CLPPQ16740 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 HSPE1P20-201ENST00000538133 289 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPPQ16740 CYCSP2-201ENST00000558168 301 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 FAM60BP-201ENST00000578364 658 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPPQ16740 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPPQ16740 AL031176.1-201ENST00000604554 466 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AC004853.1-201ENST00000604902 698 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AL450336.1-201ENST00000605180 586 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AL390208.1-201ENST00000605885 644 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 AC080013.3-201ENST00000606839 578 ntBASIC3.15□□□□□ -1.91
CLPPQ16740 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms