Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ATG10-AS1-201ENST00000504846 648 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 NAMPTP2-201ENST00000505629 1115 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 OR10V3P-201ENST00000525712 725 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.67□□□□□ -2.14
ABCA4P78363 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.67□□□□□ -2.14
ABCA4P78363 COX6CP3-201ENST00000580869 223 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 MIR5002-201ENST00000584713 97 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 VN1R80P-201ENST00000597126 338 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 RPL23AP88-201ENST00000605759 454 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 VIS1.1-201ENST00000610517 203 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AC108479.2-201ENST00000617314 601 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 RNU6-156P-201ENST00000621869 107 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AC020923.1-201ENST00000624021 917 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
ABCA4P78363 AC099654.7-201ENST00000635788 2127 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 KPNA2P1-201ENST00000458289 1591 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
ABCA4P78363 SNORD114-26-201ENST00000363543 72 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 RNU6-1077P-201ENST00000410506 102 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 RPL26P37-201ENST00000411983 438 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 AC092473.1-201ENST00000441098 221 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 CBWD4P-201ENST00000445695 655 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC109486.1-201ENST00000486833 374 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC068781.1-201ENST00000488231 618 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC140059.1-201ENST00000489238 361 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 RNU6-1073P-201ENST00000517182 106 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AP004371.1-201ENST00000525240 214 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC087241.2-201ENST00000535801 324 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA4P78363 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA4P78363 DUXAP4-201ENST00000603046 613 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC090525.3-201ENST00000605601 189 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.66□□□□□ -2.14
ABCA4P78363 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.66□□□□□ -2.14
ABCA4P78363 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA4P78363 AL356057.2-201ENST00000403318 432 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 USP9YP6-201ENST00000413550 854 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC008173.1-201ENST00000418901 264 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC023128.2-201ENST00000420880 1223 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC233728.2-201ENST00000425348 757 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 USP9YP34-201ENST00000453983 808 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA4P78363 SYPL1P1-201ENST00000473622 768 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA4P78363 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA4P78363 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA4P78363 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AL160237.3-201ENST00000604114 1013 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC008083.4-201ENST00000615076 444 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 AC090740.1-201ENST00000623193 2262 ntBASIC1.66□□□□□ -2.14
ABCA4P78363 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA4P78363 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
ABCA4P78363 U8.10-201ENST00000384260 133 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 RNU2-25P-201ENST00000411041 191 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 RPL17P49-201ENST00000443728 411 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA4P78363 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.65□□□□□ -2.14
ABCA4P78363 AC009901.1-201ENST00000506703 541 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 AC108157.1-201ENST00000510511 539 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA4P78363 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA4P78363 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA4P78363 MIR6895-201ENST00000613497 78 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 AL512283.1-201ENST00000606756 1384 ntBASIC1.65□□□□□ -2.14
ABCA4P78363 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA4P78363 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA4P78363 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA4P78363 RPL21P75-201ENST00000396599 483 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 RPL21P1-201ENST00000399532 476 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 RPL21P28-201ENST00000401418 483 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AL592114.1-201ENST00000403842 483 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.65□□□□□ -2.15
ABCA4P78363 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA4P78363 FNDC3CP-201ENST00000420795 1155 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA4P78363 MTND4LP16-201ENST00000440828 295 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 FABP5P13-201ENST00000452144 328 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA4P78363 AL163540.1-201ENST00000485382 386 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AC104564.1-201ENST00000493028 407 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 RPL21P16-201ENST00000495531 483 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA4P78363 AC113398.2-201ENST00000507630 558 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 TBCAP3-201ENST00000512475 312 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.65□□□□□ -2.15
ABCA4P78363 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
ABCA4P78363 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.65□□□□□ -2.15
ABCA4P78363 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.65□□□□□ -2.15
ABCA4P78363 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms