Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 AC006116.10-201ENST00000591836 581 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 AC010591.1-201ENST00000603941 649 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AL162713.1-201ENST00000604480 262 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AL161729.4-201ENST00000604650 476 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AP000238.1-201ENST00000608759 426 ntBASIC1.37□□□□□ -2.19
RPS28P62857 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.37□□□□□ -2.19
RPS28P62857 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AL773524.1-201ENST00000614065 229 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC104307.1-201ENST00000616142 196 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC068870.2-201ENST00000620635 389 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.37□□□□□ -2.19
RPS28P62857 AC109454.4-201ENST00000623411 649 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 MIR622-201ENST00000638396 96 ntBASIC1.37□□□□□ -2.19
RPS28P62857 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
RPS28P62857 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPS28P62857 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.36□□□□□ -2.19
RPS28P62857 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPS28P62857 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC1.36□□□□□ -2.19
RPS28P62857 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPS28P62857 RNU6-251P-201ENST00000363235 104 ntBASIC1.36□□□□□ -2.19
RPS28P62857 MIR431-201ENST00000385266 114 ntBASIC1.36□□□□□ -2.19
RPS28P62857 SNORD67-201ENST00000390833 111 ntBASIC1.36□□□□□ -2.19
RPS28P62857 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 RNU6-77P-201ENST00000410554 91 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 DBIP2-201ENST00000419076 262 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.36□□□□□ -2.19
RPS28P62857 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AL445584.1-201ENST00000431451 330 ntBASIC1.36□□□□□ -2.19
RPS28P62857 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 NDUFA5P7-201ENST00000452914 242 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AC087884.1-201ENST00000469738 328 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AC079203.1-201ENST00000487972 404 ntBASIC1.36□□□□□ -2.19
RPS28P62857 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPS28P62857 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPS28P62857 LTV1P1-201ENST00000510683 1237 ntBASIC1.36□□□□□ -2.19
RPS28P62857 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 SCARNA14-201ENST00000516903 136 ntBASIC1.36□□□□□ -2.19
RPS28P62857 RN7SKP183-201ENST00000517169 324 ntBASIC1.36□□□□□ -2.19
RPS28P62857 RNA5SP291-201ENST00000517222 105 ntBASIC1.36□□□□□ -2.19
RPS28P62857 IGJP1-201ENST00000522682 475 ntBASIC1.36□□□□□ -2.19
RPS28P62857 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPS28P62857 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.36□□□□□ -2.19
RPS28P62857 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.36□□□□□ -2.19
RPS28P62857 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 AL031274.2-201ENST00000599419 203 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.36□□□□□ -2.19
RPS28P62857 MIR7109-201ENST00000613748 65 ntBASIC1.36□□□□□ -2.19
RPS28P62857 FRG1HP-204ENST00000617940 757 ntBASIC1.36□□□□□ -2.19
RPS28P62857 MIR6732-201ENST00000619365 60 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AL445493.3-201ENST00000619568 477 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AL162233.1-201ENST00000620014 944 ntBASIC1.36□□□□□ -2.19
RPS28P62857 OR1S1-201ENST00000624470 978 ntBASIC1.36□□□□□ -2.19
RPS28P62857 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS28P62857 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RPS28P62857 MIR323A-201ENST00000362199 86 ntBASIC1.35□□□□□ -2.19
RPS28P62857 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RNA5SP305-201ENST00000362665 119 ntBASIC1.35□□□□□ -2.19
RPS28P62857 U8.3-201ENST00000363321 132 ntBASIC1.35□□□□□ -2.19
RPS28P62857 SNORD114-30-201ENST00000364448 72 ntBASIC1.35□□□□□ -2.19
RPS28P62857 SNORA51.6-201ENST00000384151 125 ntBASIC1.35□□□□□ -2.19
RPS28P62857 U8.11-201ENST00000384699 133 ntBASIC1.35□□□□□ -2.19
RPS28P62857 U8.12-201ENST00000384701 133 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RNU6-19P-201ENST00000384718 107 ntBASIC1.35□□□□□ -2.19
RPS28P62857 CISD1P1-201ENST00000393907 327 ntBASIC1.35□□□□□ -2.19
RPS28P62857 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RPS28P62857 RNA5SP231-201ENST00000410496 138 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RPL17P12-201ENST00000413391 526 ntBASIC1.35□□□□□ -2.19
RPS28P62857 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC1.35□□□□□ -2.19
RPS28P62857 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 AC092047.1-201ENST00000424997 240 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL353729.1-201ENST00000425044 720 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL591419.1-201ENST00000427423 339 ntBASIC1.35□□□□□ -2.19
RPS28P62857 C4BPAP2-201ENST00000428434 478 ntBASIC1.35□□□□□ -2.19
RPS28P62857 SDR42E1P3-201ENST00000438345 502 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 MTND6P13-201ENST00000443510 523 ntBASIC1.35□□□□□ -2.19
RPS28P62857 U8.18-201ENST00000459285 133 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC116533.1-201ENST00000459748 321 ntBASIC1.35□□□□□ -2.19
RPS28P62857 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 RPL7P18-201ENST00000478965 734 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RPL7P16-201ENST00000479738 738 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RPS4XP15-201ENST00000489210 795 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 HIGD1AP14-201ENST00000507617 282 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms