Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LSM3P62310 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 RNU1-91P-201ENST00000364746 163 ntBASIC1.7□□□□□ -2.14
LSM3P62310 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
LSM3P62310 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LSM3P62310 AL355497.1-201ENST00000406262 551 ntBASIC1.7□□□□□ -2.14
LSM3P62310 BTF3P7-201ENST00000407097 488 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AL035410.1-201ENST00000427409 427 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC010881.1-201ENST00000433830 235 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC025750.2-201ENST00000442609 450 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.7□□□□□ -2.14
LSM3P62310 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.7□□□□□ -2.14
LSM3P62310 AC004022.1-201ENST00000447766 1066 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.7□□□□□ -2.14
LSM3P62310 AL139109.1-201ENST00000455491 297 ntBASIC1.7□□□□□ -2.14
LSM3P62310 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LSM3P62310 KATNBL1P4-201ENST00000503545 918 ntBASIC1.7□□□□□ -2.14
LSM3P62310 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 AC006499.2-201ENST00000513470 337 ntBASIC1.7□□□□□ -2.14
LSM3P62310 RNU2-44P-201ENST00000516795 194 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC109329.2-201ENST00000519658 482 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.7□□□□□ -2.14
LSM3P62310 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 MTCO1P40-201ENST00000574371 625 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
LSM3P62310 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
LSM3P62310 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM3P62310 AC011471.1-201ENST00000585766 187 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.7□□□□□ -2.14
LSM3P62310 AL513477.2-201ENST00000607858 568 ntBASIC1.7□□□□□ -2.14
LSM3P62310 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.7□□□□□ -2.14
LSM3P62310 AL031601.2-202ENST00000622650 282 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC024023.1-201ENST00000624530 922 ntBASIC1.7□□□□□ -2.14
LSM3P62310 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.7□□□□□ -2.14
LSM3P62310 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LSM3P62310 MTND5P6-201ENST00000422338 1798 ntBASIC1.7□□□□□ -2.14
LSM3P62310 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LSM3P62310 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LSM3P62310 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LSM3P62310 AC006020.1-201ENST00000420179 1854 ntBASIC1.69□□□□□ -2.14
LSM3P62310 RNU6-270P-201ENST00000364131 105 ntBASIC1.69□□□□□ -2.14
LSM3P62310 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
LSM3P62310 RNU6-152P-201ENST00000384037 107 ntBASIC1.69□□□□□ -2.14
LSM3P62310 RNA5SP354-201ENST00000391247 136 ntBASIC1.69□□□□□ -2.14
LSM3P62310 MTND4LP20-201ENST00000402379 270 ntBASIC1.69□□□□□ -2.14
LSM3P62310 AL356379.1-201ENST00000414105 126 ntBASIC1.69□□□□□ -2.14
LSM3P62310 ARL2BPP3-201ENST00000421226 480 ntBASIC1.69□□□□□ -2.14
LSM3P62310 EZH2P1-201ENST00000431167 291 ntBASIC1.69□□□□□ -2.14
LSM3P62310 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM3P62310 Z85994.2-201ENST00000434327 452 ntBASIC1.69□□□□□ -2.14
LSM3P62310 ARPC3P1-201ENST00000437218 533 ntBASIC1.69□□□□□ -2.14
LSM3P62310 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM3P62310 AL109933.2-201ENST00000452651 260 ntBASIC1.69□□□□□ -2.14
LSM3P62310 OR52A4P-202ENST00000481634 799 ntBASIC1.69□□□□□ -2.14
LSM3P62310 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.69□□□□□ -2.14
LSM3P62310 AP000926.3-201ENST00000497201 299 ntBASIC1.69□□□□□ -2.14
LSM3P62310 OR52A4P-203ENST00000498233 1014 ntBASIC1.69□□□□□ -2.14
LSM3P62310 RNU6-491P-201ENST00000516099 110 ntBASIC1.69□□□□□ -2.14
LSM3P62310 RN7SKP31-201ENST00000516354 278 ntBASIC1.69□□□□□ -2.14
LSM3P62310 SNORA31.13-201ENST00000516624 135 ntBASIC1.69□□□□□ -2.14
LSM3P62310 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.69□□□□□ -2.14
LSM3P62310 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM3P62310 AC009127.3-201ENST00000570531 403 ntBASIC1.69□□□□□ -2.14
LSM3P62310 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM3P62310 AC103710.4-201ENST00000609301 899 ntBASIC1.69□□□□□ -2.14
LSM3P62310 CR589904.2-201ENST00000612533 440 ntBASIC1.69□□□□□ -2.14
LSM3P62310 AC073968.1-201ENST00000618594 637 ntBASIC1.69□□□□□ -2.14
LSM3P62310 AL356266.1-201ENST00000623311 483 ntBASIC1.69□□□□□ -2.14
LSM3P62310 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.69□□□□□ -2.14
LSM3P62310 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.69□□□□□ -2.14
LSM3P62310 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LSM3P62310 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM3P62310 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 RNA5SP289-201ENST00000362332 137 ntBASIC1.68□□□□□ -2.14
LSM3P62310 MIR524-201ENST00000385242 87 ntBASIC1.68□□□□□ -2.14
LSM3P62310 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LSM3P62310 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 VTA1P1-201ENST00000414044 866 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 AC012497.1-201ENST00000429392 575 ntBASIC1.68□□□□□ -2.14
LSM3P62310 MRPS33P4-201ENST00000434892 317 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 UBE2V1P5-201ENST00000440070 405 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 MTCYBP3-201ENST00000445588 1137 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC044797.1-201ENST00000445744 679 ntBASIC1.68□□□□□ -2.14
LSM3P62310 COX6CP12-201ENST00000446748 202 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC104073.1-201ENST00000451988 151 ntBASIC1.68□□□□□ -2.14
LSM3P62310 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AL135752.1-201ENST00000479477 471 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 RNU4-29P-201ENST00000515943 174 ntBASIC1.68□□□□□ -2.14
LSM3P62310 RNU6-928P-201ENST00000516876 104 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms