Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR3944-201ENST00000581277 108 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC125494.3-201ENST00000602759 455 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC021749.1-201ENST00000604322 607 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC004775.1-201ENST00000607389 753 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CKS1BP61024 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.67□□□□□ -2.14
CKS1BP61024 AC040168.1-201ENST00000623594 991 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC092608.2-201ENST00000624427 218 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.67□□□□□ -2.14
CKS1BP61024 AL356118.1-201ENST00000635272 1078 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 U6.107-201ENST00000637108 79 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CKS1BP61024 AC080128.1-201ENST00000474389 1917 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 AC111188.2-201ENST00000529697 1387 ntBASIC1.67□□□□□ -2.14
CKS1BP61024 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.67□□□□□ -2.14
CKS1BP61024 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.66□□□□□ -2.14
CKS1BP61024 RNU6-859P-201ENST00000362728 107 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 RNU6-441P-201ENST00000384545 106 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 RNA5SP270-201ENST00000411361 118 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.66□□□□□ -2.14
CKS1BP61024 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.66□□□□□ -2.14
CKS1BP61024 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.66□□□□□ -2.14
CKS1BP61024 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.66□□□□□ -2.14
CKS1BP61024 AC104073.1-201ENST00000451988 151 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 RPS20P24-201ENST00000457473 361 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 CAB39P1-201ENST00000502277 460 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.66□□□□□ -2.14
CKS1BP61024 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.66□□□□□ -2.14
CKS1BP61024 AC118465.1-201ENST00000513820 1271 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 RNU6-1095P-201ENST00000516148 108 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 RNA5SP282-201ENST00000516355 108 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 SNORA31.25-201ENST00000517242 134 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.66□□□□□ -2.14
CKS1BP61024 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.66□□□□□ -2.14
CKS1BP61024 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.66□□□□□ -2.14
CKS1BP61024 GTF2IP8-201ENST00000560687 584 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC105137.2-201ENST00000569073 466 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 MIR4325-201ENST00000583049 90 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC025588.2-201ENST00000604851 466 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC007619.2-201ENST00000605743 379 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC068722.2-201ENST00000618734 544 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 MIR8057-201ENST00000620957 69 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AC010872.1-201ENST00000624225 675 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 AL109659.3-201ENST00000624985 950 ntBASIC1.66□□□□□ -2.14
CKS1BP61024 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.66□□□□□ -2.14
CKS1BP61024 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CKS1BP61024 AC131280.1-202ENST00000624067 4211 ntBASIC1.65□□□□□ -2.14
CKS1BP61024 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
CKS1BP61024 SNORA71.3-201ENST00000362582 128 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 RNA5SP456-201ENST00000364002 114 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 RNU1-51P-201ENST00000365345 176 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 RNU6-444P-201ENST00000383988 108 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CKS1BP61024 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CKS1BP61024 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS1BP61024 RNF19BPX-201ENST00000426224 625 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS1BP61024 ATP5F1P1-201ENST00000433775 569 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC010881.1-201ENST00000433830 235 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 MTND4LP10-201ENST00000435146 291 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC104435.1-201ENST00000483483 166 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS1BP61024 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC112673.1-201ENST00000513168 575 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 RNU6-491P-201ENST00000516099 110 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 RNU6-798P-201ENST00000516912 103 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CKS1BP61024 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC078814.3-201ENST00000553036 491 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AL049874.4-201ENST00000557593 255 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 CYCSP39-201ENST00000565821 309 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 MIR3921-201ENST00000577308 85 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 MIR5571-201ENST00000577998 113 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC090897.2-201ENST00000581715 130 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS1BP61024 AC040174.2-201ENST00000602701 465 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CKS1BP61024 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.65□□□□□ -2.15
CKS1BP61024 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS1BP61024 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CKS1BP61024 RNA5SP68-201ENST00000363885 119 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 MIR1290-201ENST00000408735 78 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 CYCSP48-201ENST00000417124 323 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS1BP61024 RPL23AP83-201ENST00000434984 473 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 AC004383.1-201ENST00000438135 289 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS1BP61024 ELOCP3-201ENST00000439303 348 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 RPL21P133-201ENST00000443666 476 ntBASIC1.64□□□□□ -2.15
CKS1BP61024 AC124916.1-201ENST00000444020 547 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms