Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH13P55290 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH13P55290 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH13P55290 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.87
CDH13P55290 AC092125.1-201ENST00000562568 1995 ntBASIC3.4□□□□□ -1.87
CDH13P55290 SDAD1P2-201ENST00000441308 2028 ntBASIC3.39□□□□□ -1.87
CDH13P55290 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CDH13P55290 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
CDH13P55290 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH13P55290 DDX10P1-201ENST00000448545 1933 ntBASIC3.39□□□□□ -1.87
CDH13P55290 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
CDH13P55290 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH13P55290 RNA5SP515-201ENST00000364570 118 ntBASIC3.39□□□□□ -1.87
CDH13P55290 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH13P55290 MIR1290-201ENST00000408735 78 ntBASIC3.39□□□□□ -1.87
CDH13P55290 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
CDH13P55290 HSFY4P-201ENST00000415994 1181 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH13P55290 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH13P55290 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH13P55290 RABEPKP1-201ENST00000440529 1026 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH13P55290 BMI1P1-201ENST00000445879 941 ntBASIC3.39□□□□□ -1.87
CDH13P55290 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH13P55290 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH13P55290 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH13P55290 RPS3AP43-201ENST00000479743 781 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH13P55290 AL359273.1-201ENST00000510918 627 ntBASIC3.39□□□□□ -1.87
CDH13P55290 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH13P55290 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH13P55290 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH13P55290 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH13P55290 ERHP1-201ENST00000523006 310 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH13P55290 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC121247.2-201ENST00000604776 136 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC004067.1-201ENST00000608733 700 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC093838.1-201ENST00000613014 469 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AL138713.1-201ENST00000624026 2130 ntBASIC3.39□□□□□ -1.87
CDH13P55290 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH13P55290 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH13P55290 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH13P55290 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
CDH13P55290 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH13P55290 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH13P55290 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH13P55290 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH13P55290 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH13P55290 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDH13P55290 MIR1193-201ENST00000408109 78 ntBASIC3.38□□□□□ -1.87
CDH13P55290 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 ATP5A1P2-201ENST00000412323 255 ntBASIC3.38□□□□□ -1.87
CDH13P55290 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH13P55290 AP000907.1-201ENST00000428428 510 ntBASIC3.38□□□□□ -1.87
CDH13P55290 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
CDH13P55290 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 RPL21P133-201ENST00000443666 476 ntBASIC3.38□□□□□ -1.87
CDH13P55290 GDI2P2-201ENST00000445131 608 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AL592447.1-201ENST00000447592 540 ntBASIC3.38□□□□□ -1.87
CDH13P55290 MTCO1P42-201ENST00000457379 726 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 HMGN1P11-201ENST00000508668 303 ntBASIC3.38□□□□□ -1.87
CDH13P55290 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 AC109464.2-201ENST00000510242 943 ntBASIC3.38□□□□□ -1.87
CDH13P55290 SNORA70.16-201ENST00000516390 95 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH13P55290 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
CDH13P55290 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH13P55290 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH13P55290 AC008507.1-201ENST00000587506 734 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC006116.10-201ENST00000591836 581 ntBASIC3.38□□□□□ -1.87
CDH13P55290 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 VN1R85P-201ENST00000601587 426 ntBASIC3.38□□□□□ -1.87
CDH13P55290 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 AC004908.2-201ENST00000609090 574 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC012360.2-201ENST00000609349 391 ntBASIC3.38□□□□□ -1.87
CDH13P55290 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 AC024941.1-201ENST00000612250 334 ntBASIC3.38□□□□□ -1.87
CDH13P55290 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH13P55290 AC012150.2-201ENST00000621300 544 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC007494.3-201ENST00000624660 743 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC019226.1-201ENST00000625666 515 ntBASIC3.38□□□□□ -1.87
CDH13P55290 AC093591.3-201ENST00000634516 308 ntBASIC3.38□□□□□ -1.87
CDH13P55290 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.38□□□□□ -1.87
CDH13P55290 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH13P55290 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH13P55290 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH13P55290 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RNA5SP295-201ENST00000362655 121 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RNU5F-6P-201ENST00000362979 116 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RNU6-432P-201ENST00000384196 109 ntBASIC3.37□□□□□ -1.87
CDH13P55290 SNORA57.1-201ENST00000391227 145 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms