Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.14□□□□□ -1.91
CASP9P55211 AC080013.3-201ENST00000606839 578 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AC090132.2-201ENST00000615881 347 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AC013470.4-201ENST00000619978 986 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AC110801.1-201ENST00000623590 212 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AP001002.2-201ENST00000625137 386 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AC092447.10-201ENST00000620607 1652 ntBASIC3.14□□□□□ -1.91
CASP9P55211 AP000526.1-201ENST00000603308 1388 ntBASIC3.13□□□□□ -1.91
CASP9P55211 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CASP9P55211 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.13□□□□□ -1.91
CASP9P55211 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CASP9P55211 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CASP9P55211 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CASP9P55211 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
CASP9P55211 RNU6-1207P-201ENST00000384343 107 ntBASIC3.13□□□□□ -1.91
CASP9P55211 MIR514A1-201ENST00000385133 98 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AL356421.1-201ENST00000403255 413 ntBASIC3.13□□□□□ -1.91
CASP9P55211 RNA5SP107-201ENST00000411358 122 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC018630.2-202ENST00000422992 927 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 ZYG11AP1-201ENST00000430329 837 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
CASP9P55211 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
CASP9P55211 MTND1P31-201ENST00000449206 961 ntBASIC3.13□□□□□ -1.91
CASP9P55211 MTND2P24-201ENST00000453434 806 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.13□□□□□ -1.91
CASP9P55211 RPL30P9-201ENST00000465586 330 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.13□□□□□ -1.91
CASP9P55211 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 OR5B10P-201ENST00000532869 642 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP9P55211 AC124947.2-202ENST00000552735 133 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AL049838.1-201ENST00000563647 981 ntBASIC3.13□□□□□ -1.91
CASP9P55211 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.13□□□□□ -1.91
CASP9P55211 AC068313.1-201ENST00000604028 1008 ntBASIC3.13□□□□□ -1.91
CASP9P55211 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.13□□□□□ -1.91
CASP9P55211 AC009974.1-201ENST00000608881 455 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC009268.2-201ENST00000621925 457 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AC244258.1-201ENST00000637553 1071 ntBASIC3.13□□□□□ -1.91
CASP9P55211 AL392088.2-201ENST00000637607 285 ntBASIC3.13□□□□□ -1.91
CASP9P55211 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CASP9P55211 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CASP9P55211 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.12□□□□□ -1.91
CASP9P55211 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP9P55211 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CASP9P55211 RNU6-637P-201ENST00000384050 107 ntBASIC3.12□□□□□ -1.91
CASP9P55211 SNORA36C-201ENST00000384289 132 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 MTCO2P20-201ENST00000437339 673 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC092641.1-201ENST00000440229 772 ntBASIC3.12□□□□□ -1.91
CASP9P55211 CYCSP32-201ENST00000440548 321 ntBASIC3.12□□□□□ -1.91
CASP9P55211 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP9P55211 EEF1E1P1-201ENST00000446998 430 ntBASIC3.12□□□□□ -1.91
CASP9P55211 PAXBP1P1-201ENST00000449315 447 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC093392.2-201ENST00000450682 337 ntBASIC3.12□□□□□ -1.91
CASP9P55211 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AL109741.2-201ENST00000455561 343 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 RN7SL601P-201ENST00000471221 293 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC021205.2-201ENST00000480069 347 ntBASIC3.12□□□□□ -1.91
CASP9P55211 HMGB1P36-201ENST00000487709 576 ntBASIC3.12□□□□□ -1.91
CASP9P55211 GTF2IP9-201ENST00000502460 301 ntBASIC3.12□□□□□ -1.91
CASP9P55211 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 AC093281.2-201ENST00000510153 597 ntBASIC3.12□□□□□ -1.91
CASP9P55211 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 RNA5SP216-201ENST00000516111 123 ntBASIC3.12□□□□□ -1.91
CASP9P55211 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
CASP9P55211 HMGN1P28-201ENST00000521340 364 ntBASIC3.12□□□□□ -1.91
CASP9P55211 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CASP9P55211 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
CASP9P55211 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
CASP9P55211 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 HMGB1P6-201ENST00000569046 646 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC015917.1-201ENST00000579654 510 ntBASIC3.12□□□□□ -1.91
CASP9P55211 BNIP3P40-201ENST00000596017 556 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 AL133507.1-201ENST00000605269 557 ntBASIC3.12□□□□□ -1.91
CASP9P55211 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP9P55211 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
CASP9P55211 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CASP9P55211 AC022960.3-201ENST00000619794 441 ntBASIC3.12□□□□□ -1.91
CASP9P55211 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP9P55211 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP9P55211 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CASP9P55211 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CASP9P55211 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.12□□□□□ -1.91
CASP9P55211 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP9P55211 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CASP9P55211 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.11□□□□□ -1.91
CASP9P55211 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CASP9P55211 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
CASP9P55211 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CASP9P55211 CR383658.2-201ENST00000547576 1525 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms