Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
VCPP55072 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VCPP55072 AC099786.3-201ENST00000565735 1410 ntBASIC3.28□□□□□ -1.88
VCPP55072 AP002907.1-201ENST00000606361 1430 ntBASIC3.28□□□□□ -1.88
VCPP55072 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 SNORD82-201ENST00000365530 70 ntBASIC3.28□□□□□ -1.88
VCPP55072 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 RNU6-1074P-201ENST00000383995 104 ntBASIC3.28□□□□□ -1.88
VCPP55072 RNU6-906P-201ENST00000384700 70 ntBASIC3.28□□□□□ -1.88
VCPP55072 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
VCPP55072 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC016769.3-201ENST00000396562 315 ntBASIC3.28□□□□□ -1.88
VCPP55072 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
VCPP55072 MTATP6P4-201ENST00000427725 675 ntBASIC3.28□□□□□ -1.88
VCPP55072 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
VCPP55072 RPL23AP76-201ENST00000441860 458 ntBASIC3.28□□□□□ -1.88
VCPP55072 RPS12P18-201ENST00000442381 270 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.28□□□□□ -1.88
VCPP55072 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.28□□□□□ -1.88
VCPP55072 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.28□□□□□ -1.88
VCPP55072 EEF1B2P7-201ENST00000451177 676 ntBASIC3.28□□□□□ -1.88
VCPP55072 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.28□□□□□ -1.88
VCPP55072 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 RPS20P24-201ENST00000457473 361 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC092757.1-201ENST00000467293 467 ntBASIC3.28□□□□□ -1.88
VCPP55072 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 OR4G11P-201ENST00000492842 939 ntBASIC3.28□□□□□ -1.88
VCPP55072 MLLT10P2-201ENST00000506434 249 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC010460.2-201ENST00000509054 677 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC008837.2-201ENST00000513076 418 ntBASIC3.28□□□□□ -1.88
VCPP55072 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.28□□□□□ -1.88
VCPP55072 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.28□□□□□ -1.88
VCPP55072 AC005832.3-201ENST00000537929 631 ntBASIC3.28□□□□□ -1.88
VCPP55072 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.28□□□□□ -1.88
VCPP55072 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
VCPP55072 AL391156.1-201ENST00000554965 554 ntBASIC3.28□□□□□ -1.88
VCPP55072 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.28□□□□□ -1.88
VCPP55072 AL132657.2-201ENST00000564417 358 ntBASIC3.28□□□□□ -1.88
VCPP55072 MIR4524B-201ENST00000581569 115 ntBASIC3.28□□□□□ -1.88
VCPP55072 ELOCP29-201ENST00000588193 334 ntBASIC3.28□□□□□ -1.88
VCPP55072 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.28□□□□□ -1.88
VCPP55072 AC009974.1-201ENST00000608881 455 ntBASIC3.28□□□□□ -1.88
VCPP55072 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VCPP55072 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.28□□□□□ -1.88
VCPP55072 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.28□□□□□ -1.88
VCPP55072 MAPK10-322ENST00000641485 4530 ntBASIC3.28□□□□□ -1.88
VCPP55072 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 RNU6-216P-201ENST00000363282 104 ntBASIC3.27□□□□□ -1.89
VCPP55072 RNU6-560P-201ENST00000364007 108 ntBASIC3.27□□□□□ -1.89
VCPP55072 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 Y_RNA.408-201ENST00000383987 102 ntBASIC3.27□□□□□ -1.89
VCPP55072 RPS4XP8-201ENST00000402039 771 ntBASIC3.27□□□□□ -1.89
VCPP55072 RNA5SP184-201ENST00000411071 108 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 MTND2P5-201ENST00000432656 1006 ntBASIC3.27□□□□□ -1.89
VCPP55072 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
VCPP55072 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 VN1R10P-201ENST00000447106 875 ntBASIC3.27□□□□□ -1.89
VCPP55072 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
VCPP55072 RPL23AP31-201ENST00000456160 467 ntBASIC3.27□□□□□ -1.89
VCPP55072 UBL5P3-201ENST00000475112 231 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC126389.1-201ENST00000477436 290 ntBASIC3.27□□□□□ -1.89
VCPP55072 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 AC093767.1-201ENST00000504523 156 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 KLHL2P1-201ENST00000508691 521 ntBASIC3.27□□□□□ -1.89
VCPP55072 MTND2P32-201ENST00000521584 1038 ntBASIC3.27□□□□□ -1.89
VCPP55072 OR4P1P-201ENST00000530808 1136 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 AC125611.1-201ENST00000549563 229 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC034268.2-201ENST00000571784 482 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.27□□□□□ -1.89
VCPP55072 AP001269.3-201ENST00000588718 329 ntBASIC3.27□□□□□ -1.89
VCPP55072 BNIP3P26-201ENST00000600827 554 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.27□□□□□ -1.89
VCPP55072 AC120349.2-201ENST00000625002 298 ntBASIC3.27□□□□□ -1.89
VCPP55072 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.27□□□□□ -1.89
VCPP55072 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VCPP55072 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.27□□□□□ -1.89
VCPP55072 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VCPP55072 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VCPP55072 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.26□□□□□ -1.89
VCPP55072 AC062016.1-201ENST00000355719 319 ntBASIC3.26□□□□□ -1.89
VCPP55072 RNU4-92P-201ENST00000363783 136 ntBASIC3.26□□□□□ -1.89
VCPP55072 SNORD116.1-201ENST00000365628 92 ntBASIC3.26□□□□□ -1.89
VCPP55072 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCPP55072 AL590084.1-201ENST00000407885 387 ntBASIC3.26□□□□□ -1.89
VCPP55072 AL450338.1-201ENST00000407987 512 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms