Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 AC109635.3-201ENST00000529536 185 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.72□□□□□ -1.81
PGGT1BP53609 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 AC104383.1-201ENST00000530297 370 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 OR8L1P-201ENST00000534005 955 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.72□□□□□ -1.81
PGGT1BP53609 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 RN7SL703P-201ENST00000578485 302 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.72□□□□□ -1.81
PGGT1BP53609 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.72□□□□□ -1.81
PGGT1BP53609 AC245014.2-201ENST00000603689 287 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AL359999.1-201ENST00000604513 294 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC246785.4-201ENST00000605374 287 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AL390208.1-201ENST00000605885 644 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 RNA5SP108-201ENST00000605921 117 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 RNU6-87P-201ENST00000607561 108 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 OR6R2P-201ENST00000609216 300 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC023043.4-201ENST00000612081 449 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.72□□□□□ -1.81
PGGT1BP53609 AL445264.1-201ENST00000621719 171 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC139792.3-201ENST00000623525 224 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 MIR6715B-201ENST00000637172 77 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 AC099654.10-201ENST00000640395 161 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 MTND4P12-201ENST00000498999 1377 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
PGGT1BP53609 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.72□□□□□ -1.81
PGGT1BP53609 MTCO1P24-201ENST00000515438 1558 ntBASIC3.72□□□□□ -1.81
PGGT1BP53609 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PGGT1BP53609 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PGGT1BP53609 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
PGGT1BP53609 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PGGT1BP53609 PABPC1P7-201ENST00000413177 1513 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PGGT1BP53609 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.71□□□□□ -1.82
PGGT1BP53609 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PGGT1BP53609 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PGGT1BP53609 RNU5E-1-201ENST00000362477 120 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RNU6-1085P-201ENST00000363576 107 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 Y_RNA.160-201ENST00000363677 92 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 MIR30B-201ENST00000384850 88 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 MIR153-1-201ENST00000384914 90 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RPL31P1-201ENST00000398116 372 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RPL23AP48-201ENST00000406913 488 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC007283.2-201ENST00000424739 197 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RWDD4P2-201ENST00000426392 563 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AL035410.1-201ENST00000427409 427 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.71□□□□□ -1.82
PGGT1BP53609 HSPE1P28-201ENST00000443139 211 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC104073.1-201ENST00000451988 151 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 MTND1P12-201ENST00000455231 147 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 TRBV26-201ENST00000456572 344 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AMD1P1-201ENST00000457220 922 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RPL7P15-201ENST00000461190 712 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RPL37P6-202ENST00000464216 403 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC087312.1-201ENST00000471411 480 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.71□□□□□ -1.82
PGGT1BP53609 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC114967.1-201ENST00000504890 259 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC010493.1-201ENST00000513479 292 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC093677.1-201ENST00000514414 678 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC046134.1-201ENST00000514454 666 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC016065.2-201ENST00000514530 444 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC024224.1-201ENST00000538284 609 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 RAB11AP2-201ENST00000545905 639 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 PARP1P2-201ENST00000556806 195 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.71□□□□□ -1.82
PGGT1BP53609 AC025678.1-201ENST00000567861 338 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC034268.2-201ENST00000571784 482 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC090616.5-202ENST00000582111 297 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.71□□□□□ -1.82
PGGT1BP53609 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC112230.1-201ENST00000604342 547 ntBASIC3.71□□□□□ -1.82
PGGT1BP53609 AC008945.2-201ENST00000606056 604 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms