Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
EFNA3P52797 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.89□□□□□ -1.95
EFNA3P52797 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.89□□□□□ -1.95
EFNA3P52797 AC079395.1-201ENST00000510981 262 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC093677.1-201ENST00000514414 678 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 MTCO2P32-201ENST00000514865 403 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 RNU6-1095P-201ENST00000516148 108 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 RNU1-103P-201ENST00000516502 125 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 PSMA2P1-201ENST00000526365 646 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
EFNA3P52797 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.89□□□□□ -1.95
EFNA3P52797 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.89□□□□□ -1.95
EFNA3P52797 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.89□□□□□ -1.95
EFNA3P52797 AC009712.1-201ENST00000564938 316 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AL354943.1-201ENST00000572103 781 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 FAM60BP-201ENST00000578364 658 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 OR4K8P-201ENST00000578842 1048 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.89□□□□□ -1.95
EFNA3P52797 AL451007.1-201ENST00000595491 289 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 VN1R82P-201ENST00000601481 356 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC006270.3-201ENST00000605967 1036 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC004832.5-201ENST00000608677 401 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC006023.2-201ENST00000609916 167 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AL355493.4-201ENST00000618530 292 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AP000484.1-201ENST00000620067 1252 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AL353748.2-201ENST00000622148 471 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC099506.2-201ENST00000623074 221 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.89□□□□□ -1.95
EFNA3P52797 SCARNA15.3-201ENST00000626315 122 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 SCARNA4.1-201ENST00000628597 123 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
EFNA3P52797 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.89□□□□□ -1.95
EFNA3P52797 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.88□□□□□ -1.95
EFNA3P52797 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EFNA3P52797 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EFNA3P52797 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EFNA3P52797 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 RNU6-50P-201ENST00000362356 103 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AF228730.1-201ENST00000397972 663 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 UBA52P6-201ENST00000399822 382 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 MIR1284-201ENST00000408337 120 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 RPS7P13-201ENST00000413955 498 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 YPEL5P1-201ENST00000419731 367 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 RPL7P30-201ENST00000420888 709 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 MTATP6P17-201ENST00000431030 672 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 MUPP-201ENST00000438111 566 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 AL831737.1-201ENST00000441288 271 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.88□□□□□ -1.95
EFNA3P52797 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 SUMO2P2-201ENST00000456482 255 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 RNU7-136P-201ENST00000458819 69 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 ST13P14-201ENST00000474095 734 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EFNA3P52797 RPL7P18-201ENST00000478965 734 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL049873.1-201ENST00000480540 376 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 MTND2P14-201ENST00000482139 351 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.88□□□□□ -1.95
EFNA3P52797 AC114981.1-201ENST00000503897 678 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.88□□□□□ -1.95
EFNA3P52797 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 SNORA64.4-201ENST00000516632 81 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AC009812.2-201ENST00000517657 457 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.88□□□□□ -1.95
EFNA3P52797 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
EFNA3P52797 AC023538.1-201ENST00000534576 736 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.88□□□□□ -1.95
EFNA3P52797 EIF4BP1-201ENST00000554881 351 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.88□□□□□ -1.95
EFNA3P52797 AC004987.4-201ENST00000603383 338 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AL360181.4-201ENST00000621752 134 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AC006386.2-201ENST00000624491 75 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 AC012005.1-201ENST00000624575 75 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 MIR622-201ENST00000638396 96 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EFNA3P52797 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
EFNA3P52797 ZNF807-201ENST00000328088 1707 ntBASIC2.88□□□□□ -1.95
EFNA3P52797 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
EFNA3P52797 OR4G11P-202ENST00000642116 1414 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
EFNA3P52797 RNU6-1214P-201ENST00000363650 109 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 U3.26-201ENST00000391236 204 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 SAR1AP2-201ENST00000392696 594 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 AL138885.1-201ENST00000405921 675 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 NDUFB4P5-201ENST00000415445 361 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
EFNA3P52797 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.87□□□□□ -1.95
EFNA3P52797 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.87□□□□□ -1.95
EFNA3P52797 RPL7P46-201ENST00000425129 740 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 AC092447.3-201ENST00000426027 686 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.87□□□□□ -1.95
EFNA3P52797 CETN4P-201ENST00000432407 469 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 MTCO2P20-201ENST00000437339 673 ntBASIC2.87□□□□□ -1.95
EFNA3P52797 HIGD1AP11-201ENST00000438361 280 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms