Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.88□□□□□ -1.95
SMARCA4P51532 USP9YP27-201ENST00000418455 438 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 AC099336.2-201ENST00000422457 254 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 PIGFP3-201ENST00000441918 722 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.88□□□□□ -1.95
SMARCA4P51532 RPS4XP11-201ENST00000446897 772 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
SMARCA4P51532 HAUS1P1-201ENST00000505275 832 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 MTCO1P30-201ENST00000515244 580 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 RNU4-18P-201ENST00000516751 149 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 AC015720.1-201ENST00000565251 277 ntBASIC2.88□□□□□ -1.95
SMARCA4P51532 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
SMARCA4P51532 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.87□□□□□ -1.95
SMARCA4P51532 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMARCA4P51532 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SMARCA4P51532 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCA4P51532 AL358075.3-201ENST00000426289 226 ntBASIC2.87□□□□□ -1.95
SMARCA4P51532 ARPC3P2-201ENST00000457786 533 ntBASIC2.87□□□□□ -1.95
SMARCA4P51532 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCA4P51532 AC098799.2-201ENST00000509466 868 ntBASIC2.87□□□□□ -1.95
SMARCA4P51532 RNU2-58P-201ENST00000516403 183 ntBASIC2.87□□□□□ -1.95
SMARCA4P51532 NPM1P52-201ENST00000518264 846 ntBASIC2.87□□□□□ -1.95
SMARCA4P51532 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.87□□□□□ -1.95
SMARCA4P51532 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMARCA4P51532 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMARCA4P51532 RNU1-42P-201ENST00000364033 160 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.86□□□□□ -1.95
SMARCA4P51532 RN7SKP234-201ENST00000517173 224 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AC116447.1-201ENST00000613153 453 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMARCA4P51532 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMARCA4P51532 MIR96-201ENST00000362288 78 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 SNORA7.1-201ENST00000363750 139 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 RNU4-7P-201ENST00000364758 141 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 XKRYP4-201ENST00000414395 483 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 MTND4LP13-201ENST00000425022 298 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AC114973.1-201ENST00000429057 632 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 XKRYP5-201ENST00000449659 483 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMARCA4P51532 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.86□□□□□ -1.95
SMARCA4P51532 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMARCA4P51532 AC138649.5-201ENST00000637456 137 ntBASIC2.86□□□□□ -1.95
SMARCA4P51532 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCA4P51532 RPS3AP9-201ENST00000417027 792 ntBASIC2.85□□□□□ -1.95
SMARCA4P51532 WARS2P1-201ENST00000429678 537 ntBASIC2.85□□□□□ -1.95
SMARCA4P51532 MTND2P2-201ENST00000434633 945 ntBASIC2.85□□□□□ -1.95
SMARCA4P51532 CLIC4P1-201ENST00000453177 535 ntBASIC2.85□□□□□ -1.95
SMARCA4P51532 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AL133370.2-201ENST00000619934 439 ntBASIC2.85□□□□□ -1.95
SMARCA4P51532 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SMARCA4P51532 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCA4P51532 TPT1P14-201ENST00000448018 505 ntBASIC2.84□□□□□ -1.95
SMARCA4P51532 AC078918.1-201ENST00000498515 228 ntBASIC2.84□□□□□ -1.95
SMARCA4P51532 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCA4P51532 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.95
SMARCA4P51532 AC084757.1-201ENST00000559987 490 ntBASIC2.84□□□□□ -1.95
SMARCA4P51532 SNORD53B-201ENST00000577887 78 ntBASIC2.84□□□□□ -1.95
SMARCA4P51532 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCA4P51532 MIR3199-1-201ENST00000582434 88 ntBASIC2.84□□□□□ -1.95
SMARCA4P51532 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.84□□□□□ -1.95
SMARCA4P51532 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.96
SMARCA4P51532 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMARCA4P51532 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMARCA4P51532 RNU6-697P-201ENST00000363348 107 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 AC093084.1-201ENST00000424233 687 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCA4P51532 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.83□□□□□ -1.96
SMARCA4P51532 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.83□□□□□ -1.96
SMARCA4P51532 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCA4P51532 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCA4P51532 AC098679.5-201ENST00000624394 571 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 AC092159.4-201ENST00000624944 550 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 BX649567.1-201ENST00000642071 1134 ntBASIC2.83□□□□□ -1.96
SMARCA4P51532 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCA4P51532 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMARCA4P51532 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMARCA4P51532 RNA5SP295-201ENST00000362655 121 ntBASIC2.82□□□□□ -1.96
SMARCA4P51532 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.82□□□□□ -1.96
SMARCA4P51532 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.82□□□□□ -1.96
SMARCA4P51532 AL109741.2-201ENST00000455561 343 ntBASIC2.82□□□□□ -1.96
SMARCA4P51532 HMGB3P30-201ENST00000457863 606 ntBASIC2.82□□□□□ -1.96
SMARCA4P51532 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.82□□□□□ -1.96
SMARCA4P51532 AC006270.2-201ENST00000578523 652 ntBASIC2.82□□□□□ -1.96
SMARCA4P51532 AC022709.1-201ENST00000615967 87 ntBASIC2.82□□□□□ -1.96
SMARCA4P51532 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.82□□□□□ -1.96
SMARCA4P51532 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SMARCA4P51532 SNORD114-22-201ENST00000365423 72 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms