Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 Y_RNA.687-201ENST00000516558 91 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 RNU6-352P-201ENST00000516908 107 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 IGLVIV-53-201ENST00000520107 367 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.86□□□□□ -1.31
PRIM1P49642 MIR4270-201ENST00000581799 70 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 ELOCP5-201ENST00000604924 333 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 AC008962.1-201ENST00000605729 304 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PRIM1P49642 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.86□□□□□ -1.31
PRIM1P49642 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PRIM1P49642 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PRIM1P49642 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PRIM1P49642 AC008758.3-201ENST00000507003 1829 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PRIM1P49642 Y_RNA.274-201ENST00000364714 101 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 RNA5SP505-201ENST00000364748 108 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 RNU6-790P-201ENST00000384479 105 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.85□□□□□ -1.31
PRIM1P49642 AL445305.1-201ENST00000432577 575 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.85□□□□□ -1.31
PRIM1P49642 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.85□□□□□ -1.31
PRIM1P49642 FHP1-201ENST00000442741 703 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AC010655.1-201ENST00000449336 292 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AC234775.1-201ENST00000454247 670 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 snoU109.4-201ENST00000458953 143 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AP000942.1-201ENST00000463969 747 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.85□□□□□ -1.31
PRIM1P49642 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.85□□□□□ -1.31
PRIM1P49642 SNORA25.14-201ENST00000516481 132 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 RNU6-347P-201ENST00000516658 105 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.85□□□□□ -1.31
PRIM1P49642 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.85□□□□□ -1.31
PRIM1P49642 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 MIR5692A1-201ENST00000580523 69 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 RN7SL356P-201ENST00000582228 248 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 MIR4737-201ENST00000583979 81 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 AC025588.3-201ENST00000604182 274 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 TUG1_2.1-201ENST00000614234 87 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.85□□□□□ -1.31
PRIM1P49642 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PRIM1P49642 SAMMSON-213ENST00000641336 1521 ntBASIC6.85□□□□□ -1.31
PRIM1P49642 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PRIM1P49642 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PRIM1P49642 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.84□□□□□ -1.31
PRIM1P49642 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
PRIM1P49642 AC004158.1-201ENST00000564508 4319 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PRIM1P49642 AC093849.1-201ENST00000563631 2209 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 IQCB2P-201ENST00000401788 1633 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.84□□□□□ -1.31
PRIM1P49642 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 SNORD81.1-201ENST00000363064 77 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 RN7SKP113-201ENST00000363891 295 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 RNU6-187P-201ENST00000384139 106 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AC007098.1-201ENST00000420122 367 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 RPS12P5-201ENST00000423449 371 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 RPL34P20-201ENST00000442771 351 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.84□□□□□ -1.31
PRIM1P49642 AL162389.1-201ENST00000449233 177 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 OR2AQ1P-201ENST00000451972 200 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.84□□□□□ -1.31
PRIM1P49642 AC007967.1-201ENST00000455422 1159 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AP000797.2-201ENST00000475768 606 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 NDUFB4P9-201ENST00000511646 388 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 RFPL4AP5-201ENST00000514977 504 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.84□□□□□ -1.31
PRIM1P49642 AC009852.2-201ENST00000567898 485 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 MIR4675-201ENST00000577898 77 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 MIR4433B-201ENST00000581329 102 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PRIM1P49642 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.84□□□□□ -1.31
PRIM1P49642 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 AP001282.2-201ENST00000616149 309 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 AC123768.4-201ENST00000616244 701 ntBASIC6.84□□□□□ -1.31
PRIM1P49642 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.84□□□□□ -1.31
PRIM1P49642 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PRIM1P49642 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PRIM1P49642 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.84□□□□□ -1.32
PRIM1P49642 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
PRIM1P49642 AL049555.1-201ENST00000562834 1933 ntBASIC6.84□□□□□ -1.32
PRIM1P49642 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms