Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.68□□□□□ -2.14
CENPFP49454 AC007687.1-201ENST00000602704 304 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.67□□□□□ -2.14
CENPFP49454 AL583843.1-201ENST00000456070 346 ntBASIC1.67□□□□□ -2.14
CENPFP49454 AC091544.1-201ENST00000484702 348 ntBASIC1.67□□□□□ -2.14
CENPFP49454 MTCYBP18-201ENST00000501056 747 ntBASIC1.67□□□□□ -2.14
CENPFP49454 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.67□□□□□ -2.14
CENPFP49454 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.67□□□□□ -2.14
CENPFP49454 AL021368.2-201ENST00000606125 5352 ntBASIC1.67□□□□□ -2.14
CENPFP49454 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.67□□□□□ -2.14
CENPFP49454 USP9YP27-201ENST00000418455 438 ntBASIC1.67□□□□□ -2.14
CENPFP49454 RPL30P3-201ENST00000424262 333 ntBASIC1.67□□□□□ -2.14
CENPFP49454 RPS3AP44-201ENST00000425466 790 ntBASIC1.67□□□□□ -2.14
CENPFP49454 CALM1P1-201ENST00000442082 433 ntBASIC1.67□□□□□ -2.14
CENPFP49454 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.67□□□□□ -2.14
CENPFP49454 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.67□□□□□ -2.14
CENPFP49454 AL627230.5-201ENST00000619807 58 ntBASIC1.67□□□□□ -2.14
CENPFP49454 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CENPFP49454 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.66□□□□□ -2.14
CENPFP49454 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.66□□□□□ -2.14
CENPFP49454 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.66□□□□□ -2.14
CENPFP49454 AC005534.2-201ENST00000431047 433 ntBASIC1.66□□□□□ -2.14
CENPFP49454 RPS27P5-201ENST00000444247 244 ntBASIC1.66□□□□□ -2.14
CENPFP49454 HMGB3P26-201ENST00000560051 582 ntBASIC1.66□□□□□ -2.14
CENPFP49454 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CENPFP49454 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CENPFP49454 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.66□□□□□ -2.14
CENPFP49454 MIR373-201ENST00000362273 69 ntBASIC1.66□□□□□ -2.14
CENPFP49454 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.66□□□□□ -2.14
CENPFP49454 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.66□□□□□ -2.14
CENPFP49454 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CENPFP49454 AC021087.2-201ENST00000504656 1203 ntBASIC1.66□□□□□ -2.14
CENPFP49454 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.66□□□□□ -2.14
CENPFP49454 AC021146.7-201ENST00000509604 775 ntBASIC1.66□□□□□ -2.14
CENPFP49454 FABP5P5-201ENST00000515537 406 ntBASIC1.66□□□□□ -2.14
CENPFP49454 RNA5SP436-201ENST00000516020 115 ntBASIC1.66□□□□□ -2.14
CENPFP49454 AC023825.1-201ENST00000566704 1030 ntBASIC1.66□□□□□ -2.14
CENPFP49454 AC138649.5-201ENST00000637456 137 ntBASIC1.66□□□□□ -2.14
CENPFP49454 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CENPFP49454 MCTS2P-201ENST00000394552 546 ntBASIC1.66□□□□□ -2.14
CENPFP49454 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.66□□□□□ -2.14
CENPFP49454 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CENPFP49454 AL592494.3-201ENST00000609485 464 ntBASIC1.66□□□□□ -2.14
CENPFP49454 AC083806.3-201ENST00000614016 455 ntBASIC1.66□□□□□ -2.14
CENPFP49454 STMN1P1-201ENST00000617809 440 ntBASIC1.66□□□□□ -2.14
CENPFP49454 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CENPFP49454 THAP5P1-201ENST00000439089 262 ntBASIC1.65□□□□□ -2.14
CENPFP49454 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.65□□□□□ -2.14
CENPFP49454 AC096992.1-201ENST00000459808 709 ntBASIC1.65□□□□□ -2.14
CENPFP49454 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.65□□□□□ -2.14
CENPFP49454 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CENPFP49454 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.65□□□□□ -2.15
CENPFP49454 RPL31P2-201ENST00000413849 377 ntBASIC1.65□□□□□ -2.15
CENPFP49454 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.65□□□□□ -2.15
CENPFP49454 SETP8-201ENST00000435341 628 ntBASIC1.65□□□□□ -2.15
CENPFP49454 MTCYBP12-201ENST00000440559 1134 ntBASIC1.65□□□□□ -2.15
CENPFP49454 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CENPFP49454 AC097634.1-201ENST00000604491 2467 ntBASIC1.65□□□□□ -2.15
CENPFP49454 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.65□□□□□ -2.15
CENPFP49454 ZNF271P-202ENST00000465539 1970 ntBASIC1.65□□□□□ -2.15
CENPFP49454 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CENPFP49454 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.64□□□□□ -2.15
CENPFP49454 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CENPFP49454 TPT1P14-201ENST00000448018 505 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC008885.2-201ENST00000509506 930 ntBASIC1.64□□□□□ -2.15
CENPFP49454 MIR5000-201ENST00000577717 103 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.64□□□□□ -2.15
CENPFP49454 AC096772.1-201ENST00000609146 564 ntBASIC1.64□□□□□ -2.15
CENPFP49454 FAM35CP-201ENST00000554755 2470 ntBASIC1.64□□□□□ -2.15
CENPFP49454 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC002546.1-201ENST00000588041 2504 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.64□□□□□ -2.15
CENPFP49454 AC090819.1-201ENST00000523800 1111 ntBASIC1.64□□□□□ -2.15
CENPFP49454 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.64□□□□□ -2.15
CENPFP49454 AC090071.1-201ENST00000507713 644 ntBASIC1.64□□□□□ -2.15
CENPFP49454 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC087373.1-201ENST00000524920 491 ntBASIC1.64□□□□□ -2.15
CENPFP49454 SULT1C2P1-202ENST00000562418 459 ntBASIC1.64□□□□□ -2.15
CENPFP49454 AC112191.3-201ENST00000604371 277 ntBASIC1.64□□□□□ -2.15
CENPFP49454 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CENPFP49454 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
CENPFP49454 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
CENPFP49454 RPL19P1-201ENST00000411635 428 ntBASIC1.63□□□□□ -2.15
CENPFP49454 MTND1P23-201ENST00000416931 372 ntBASIC1.63□□□□□ -2.15
CENPFP49454 RFC5P1-201ENST00000454419 874 ntBASIC1.63□□□□□ -2.15
CENPFP49454 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.63□□□□□ -2.15
CENPFP49454 AC023813.2-201ENST00000564321 469 ntBASIC1.63□□□□□ -2.15
CENPFP49454 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CENPFP49454 BNIP3P4-201ENST00000604946 565 ntBASIC1.63□□□□□ -2.15
CENPFP49454 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CENPFP49454 RNU6-328P-201ENST00000390887 106 ntBASIC1.63□□□□□ -2.15
CENPFP49454 GTF2IP7-202ENST00000436677 309 ntBASIC1.63□□□□□ -2.15
CENPFP49454 RPL34P26-201ENST00000445636 354 ntBASIC1.63□□□□□ -2.15
CENPFP49454 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.63□□□□□ -2.15
CENPFP49454 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
CENPFP49454 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CENPFP49454 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CENPFP49454 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.62□□□□□ -2.15
CENPFP49454 DYNLL1P5-201ENST00000467158 270 ntBASIC1.62□□□□□ -2.15
CENPFP49454 PRELID2P1-201ENST00000552837 301 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms