Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU5E-8P-201ENST00000363502 116 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RNU6-432P-201ENST00000384196 109 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RNU6-1042P-201ENST00000384204 107 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 SNORA57.3-201ENST00000411095 141 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC092473.1-201ENST00000441098 221 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL662791.1-201ENST00000441992 928 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AC244505.5-201ENST00000443639 207 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RPL17P49-201ENST00000443728 411 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RPS29P31-201ENST00000446147 164 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 GAPDHP17-201ENST00000449858 1001 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 MTND1P27-201ENST00000451117 902 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX2-1P43699 RNU7-59P-201ENST00000459101 61 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC011276.1-201ENST00000469688 323 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RN7SL459P-201ENST00000481078 302 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC011825.1-201ENST00000484967 388 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 RPS3AP50-201ENST00000487064 803 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC055855.1-201ENST00000489563 579 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-1P43699 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 SNORA31.22-201ENST00000517204 135 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 ERHP1-201ENST00000523006 310 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC009643.1-201ENST00000532030 391 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 CYCSP29-201ENST00000533731 318 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AC068831.4-201ENST00000556118 109 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-1P43699 COX6CP3-201ENST00000580869 223 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX2-1P43699 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 CKS1BP3-201ENST00000600888 237 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC068790.6-201ENST00000602558 258 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AP003465.2-201ENST00000602571 373 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL137849.1-201ENST00000604767 169 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AL355472.4-201ENST00000610233 626 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL592295.2-201ENST00000612578 206 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AL110115.1-201ENST00000614396 364 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC006338.2-201ENST00000616864 791 ntBASIC3.14□□□□□ -1.91
NKX2-1P43699 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-1P43699 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-1P43699 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-1P43699 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 RNA5SP443-201ENST00000363083 132 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RNU1-132P-201ENST00000364300 164 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RNU4-75P-201ENST00000364621 146 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RNA5SP366-201ENST00000365454 123 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 Y_RNA.359-201ENST00000365498 102 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RNU6-809P-201ENST00000384461 107 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 MIR19A-201ENST00000384878 82 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 AL109755.1-201ENST00000401791 649 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 Y_RNA.599-201ENST00000410489 109 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RNU2-8P-201ENST00000410727 190 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RN7SKP33-201ENST00000410942 340 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 RPS3AP44-201ENST00000425466 790 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 BTF3P10-201ENST00000433415 495 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AL022238.1-201ENST00000442557 355 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 ELOCP30-201ENST00000447108 299 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 RPS11P1-201ENST00000451072 473 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 MTCO2P29-201ENST00000465212 189 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC084198.1-201ENST00000477747 402 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC135721.1-201ENST00000497954 479 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC105252.1-201ENST00000503089 286 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 NPM1P41-201ENST00000512920 831 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 RN7SKP298-201ENST00000515950 94 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 DUXAP2-201ENST00000519198 589 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC125611.2-201ENST00000551907 647 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 MIR4284-201ENST00000578924 81 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 263.3 ms