Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF90P1-201ENST00000480493 1951 ntBASIC1.57□□□□□ -2.16
SNCAP37840 SDAD1P2-201ENST00000441308 2028 ntBASIC1.57□□□□□ -2.16
SNCAP37840 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SNCAP37840 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNCAP37840 AL122016.1-201ENST00000403365 367 ntBASIC1.56□□□□□ -2.16
SNCAP37840 RN7SKP32-201ENST00000410167 303 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.56□□□□□ -2.16
SNCAP37840 RPL35AP22-201ENST00000436855 335 ntBASIC1.56□□□□□ -2.16
SNCAP37840 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SNCAP37840 TPT1P14-201ENST00000448018 505 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AL034418.1-201ENST00000448675 860 ntBASIC1.56□□□□□ -2.16
SNCAP37840 SNRPGP6-201ENST00000451124 220 ntBASIC1.56□□□□□ -2.16
SNCAP37840 EEF1B2P7-201ENST00000451177 676 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC010099.1-201ENST00000455434 375 ntBASIC1.56□□□□□ -2.16
SNCAP37840 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 RPS29P20-201ENST00000489592 171 ntBASIC1.56□□□□□ -2.16
SNCAP37840 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.56□□□□□ -2.16
SNCAP37840 SNORA31.8-201ENST00000516327 108 ntBASIC1.56□□□□□ -2.16
SNCAP37840 RNU6-1004P-201ENST00000516584 111 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC087272.1-201ENST00000523624 533 ntBASIC1.56□□□□□ -2.16
SNCAP37840 OR4V1P-201ENST00000525394 1140 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC087276.1-201ENST00000529659 480 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AP000867.2-201ENST00000532468 320 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.56□□□□□ -2.16
SNCAP37840 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
SNCAP37840 MIR3117-201ENST00000584034 78 ntBASIC1.56□□□□□ -2.16
SNCAP37840 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 CR589904.2-201ENST00000612533 440 ntBASIC1.56□□□□□ -2.16
SNCAP37840 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 AL356266.1-201ENST00000623311 483 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC244517.12-201ENST00000623581 663 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.56□□□□□ -2.16
SNCAP37840 MTND4P27-201ENST00000450813 1354 ntBASIC1.56□□□□□ -2.16
SNCAP37840 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.56□□□□□ -2.16
SNCAP37840 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
SNCAP37840 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNCAP37840 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 SNORA68.1-201ENST00000364537 132 ntBASIC1.55□□□□□ -2.16
SNCAP37840 CIR1P3-201ENST00000405137 479 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.55□□□□□ -2.16
SNCAP37840 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.55□□□□□ -2.16
SNCAP37840 ARL2BPP3-201ENST00000421226 480 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 AL353705.4-201ENST00000449661 238 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 RPL31P41-201ENST00000477967 372 ntBASIC1.55□□□□□ -2.16
SNCAP37840 OR4G11P-201ENST00000492842 939 ntBASIC1.55□□□□□ -2.16
SNCAP37840 EIF4EP3-201ENST00000498782 656 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 SNORA31.23-201ENST00000517219 133 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 AC118942.1-201ENST00000529674 1035 ntBASIC1.55□□□□□ -2.16
SNCAP37840 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 AC087481.2-201ENST00000565492 330 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC106782.4-201ENST00000568264 210 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
SNCAP37840 MIR5089-201ENST00000580047 84 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 KATNBL1P1-201ENST00000605192 748 ntBASIC1.55□□□□□ -2.16
SNCAP37840 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.55□□□□□ -2.16
SNCAP37840 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
SNCAP37840 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 IGHVIII-44-202ENST00000636235 289 ntBASIC1.55□□□□□ -2.16
SNCAP37840 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNCAP37840 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
SNCAP37840 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.54□□□□□ -2.16
SNCAP37840 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.54□□□□□ -2.16
SNCAP37840 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SNCAP37840 RNU6-244P-201ENST00000391028 104 ntBASIC1.54□□□□□ -2.16
SNCAP37840 RNA5SP425-201ENST00000410336 112 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AL139156.1-201ENST00000412785 841 ntBASIC1.54□□□□□ -2.16
SNCAP37840 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.54□□□□□ -2.16
SNCAP37840 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AL049873.1-201ENST00000480540 376 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC027309.2-201ENST00000520566 192 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.54□□□□□ -2.16
SNCAP37840 AC068339.2-201ENST00000534395 618 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC139103.1-201ENST00000534696 1030 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AC023824.2-201ENST00000566185 400 ntBASIC1.54□□□□□ -2.16
SNCAP37840 MIR1273D-201ENST00000577266 86 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.54□□□□□ -2.16
SNCAP37840 AC079089.3-201ENST00000603094 673 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AC107214.2-201ENST00000608204 634 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AP001521.1-201ENST00000609150 300 ntBASIC1.54□□□□□ -2.16
SNCAP37840 SDR42E1P2-201ENST00000614861 481 ntBASIC1.54□□□□□ -2.16
SNCAP37840 AP001486.3-201ENST00000615334 372 ntBASIC1.54□□□□□ -2.16
SNCAP37840 SDR42E1P4-201ENST00000620894 481 ntBASIC1.54□□□□□ -2.16
SNCAP37840 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.54□□□□□ -2.16
SNCAP37840 AL390862.1-201ENST00000635467 1469 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms