Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 EEF1E1P1-201ENST00000446998 430 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 RN7SL601P-201ENST00000471221 293 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 DSTNP2-201ENST00000504533 515 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.38□□□□□ -1.87
CTNNA1P35221 HMGN1P28-201ENST00000521340 364 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC068135.2-201ENST00000569293 1028 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNNA1P35221 MIR3922-201ENST00000585192 84 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AL136363.1-201ENST00000605349 337 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC022306.3-201ENST00000619930 550 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC010608.3-201ENST00000625048 527 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNNA1P35221 AC012442.3-202ENST00000636742 206 ntBASIC3.38□□□□□ -1.87
CTNNA1P35221 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC022336.2-201ENST00000568966 2538 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AL049781.1-201ENST00000623195 3585 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 SNORA23-201ENST00000365128 182 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 RNU6-636P-201ENST00000384598 107 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 SNORA46-201ENST00000384762 135 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTNNA1P35221 AL445189.1-201ENST00000405722 338 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.37□□□□□ -1.87
CTNNA1P35221 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.37□□□□□ -1.87
CTNNA1P35221 RN7SKP202-201ENST00000410439 330 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 RNU6-516P-201ENST00000411381 104 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AL390023.1-201ENST00000428836 262 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTNNA1P35221 CBWD4P-201ENST00000445695 655 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 UQCRHP3-201ENST00000451503 251 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CTNNA1P35221 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 UBE2V1P12-201ENST00000503954 474 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
CTNNA1P35221 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CTNNA1P35221 NBEAP1-201ENST00000554452 979 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC090888.1-201ENST00000561335 1141 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC005951.2-201ENST00000576282 495 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC020895.1-201ENST00000595362 272 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 RPL23AP78-201ENST00000599928 470 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC073657.2-201ENST00000605661 303 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 AC004852.3-201ENST00000614131 326 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC013476.2-201ENST00000614456 459 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
CTNNA1P35221 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNNA1P35221 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CTNNA1P35221 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTNNA1P35221 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTNNA1P35221 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC008669.1-201ENST00000565823 2178 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNA1P35221 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNA1P35221 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNNA1P35221 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNA1P35221 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 RNU6-777P-201ENST00000364265 104 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNA1P35221 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CTNNA1P35221 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 HMGN1P24-201ENST00000412282 298 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 HSFY4P-201ENST00000415994 1181 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AL353678.1-201ENST00000422735 741 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNA1P35221 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC244505.4-201ENST00000434905 287 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 SSXP5-201ENST00000443473 287 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNA1P35221 LARP1BP2-201ENST00000486594 519 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC021678.1-201ENST00000505195 936 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC119751.4-201ENST00000507498 357 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 RNA5SP216-201ENST00000516111 123 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms