Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
SHC1P29353 DUXAP2-201ENST00000519198 589 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AP003392.2-201ENST00000527269 208 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.11□□□□□ -1.91
SHC1P29353 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.11□□□□□ -1.91
SHC1P29353 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 SULT1C2P1-202ENST00000562418 459 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC037471.2-201ENST00000564941 598 ntBASIC3.11□□□□□ -1.91
SHC1P29353 MIR4528-201ENST00000577763 90 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC053481.3-201ENST00000577881 843 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC010928.3-201ENST00000587712 541 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 BNIP3P33-201ENST00000598912 569 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC091805.2-201ENST00000603848 235 ntBASIC3.11□□□□□ -1.91
SHC1P29353 NDUFA8P1-201ENST00000605525 367 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC108747.1-201ENST00000609508 535 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC008498.1-201ENST00000613012 531 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
SHC1P29353 MIR6075-201ENST00000620782 95 ntBASIC3.11□□□□□ -1.91
SHC1P29353 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC110801.1-201ENST00000623590 212 ntBASIC3.11□□□□□ -1.91
SHC1P29353 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 AC068137.3-201ENST00000639191 341 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC073869.6-201ENST00000640656 341 ntBASIC3.11□□□□□ -1.91
SHC1P29353 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.11□□□□□ -1.91
SHC1P29353 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
SHC1P29353 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 PABPC1P7-201ENST00000413177 1513 ntBASIC3.1□□□□□ -1.91
SHC1P29353 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 RNU6-1243P-201ENST00000364028 107 ntBASIC3.1□□□□□ -1.91
SHC1P29353 RNU6-777P-201ENST00000364265 104 ntBASIC3.1□□□□□ -1.91
SHC1P29353 ARF4P3-201ENST00000397387 509 ntBASIC3.1□□□□□ -1.91
SHC1P29353 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
SHC1P29353 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
SHC1P29353 BX323014.1-201ENST00000412876 237 ntBASIC3.1□□□□□ -1.91
SHC1P29353 HMGB1P11-201ENST00000413899 637 ntBASIC3.1□□□□□ -1.91
SHC1P29353 RAD23BP2-201ENST00000416003 1207 ntBASIC3.1□□□□□ -1.91
SHC1P29353 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
SHC1P29353 FNDC3CP-201ENST00000420795 1155 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AP000907.1-201ENST00000428428 510 ntBASIC3.1□□□□□ -1.91
SHC1P29353 YME1L1P1-201ENST00000429435 297 ntBASIC3.1□□□□□ -1.91
SHC1P29353 C8orf59P1-201ENST00000429930 303 ntBASIC3.1□□□□□ -1.91
SHC1P29353 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.1□□□□□ -1.91
SHC1P29353 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 LSM1P1-201ENST00000438629 273 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.1□□□□□ -1.91
SHC1P29353 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 SUMO2P2-201ENST00000456482 255 ntBASIC3.1□□□□□ -1.91
SHC1P29353 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
SHC1P29353 AC010301.1-201ENST00000473936 355 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
SHC1P29353 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.1□□□□□ -1.91
SHC1P29353 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.1□□□□□ -1.91
SHC1P29353 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
SHC1P29353 SNORA70.19-201ENST00000516717 90 ntBASIC3.1□□□□□ -1.91
SHC1P29353 RN7SKP289-201ENST00000517244 295 ntBASIC3.1□□□□□ -1.91
SHC1P29353 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AP002748.2-201ENST00000528671 348 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
SHC1P29353 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 AC004024.1-201ENST00000549244 247 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
SHC1P29353 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 MIR4504-201ENST00000577413 92 ntBASIC3.1□□□□□ -1.91
SHC1P29353 MTATP6P3-201ENST00000581686 676 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.1□□□□□ -1.91
SHC1P29353 AC008739.3-201ENST00000603262 127 ntBASIC3.1□□□□□ -1.91
SHC1P29353 YWHAQP7-201ENST00000603536 658 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.1□□□□□ -1.91
SHC1P29353 MIR7851-201ENST00000610611 160 ntBASIC3.1□□□□□ -1.91
SHC1P29353 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC092794.1-201ENST00000612734 582 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AL603839.4-201ENST00000624658 1005 ntBASIC3.1□□□□□ -1.91
SHC1P29353 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 U6.105-201ENST00000637379 88 ntBASIC3.1□□□□□ -1.91
SHC1P29353 AC092447.7-201ENST00000422212 1621 ntBASIC3.1□□□□□ -1.91
SHC1P29353 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SHC1P29353 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 AL157700.1-201ENST00000561973 1432 ntBASIC3.1□□□□□ -1.91
SHC1P29353 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
SHC1P29353 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHC1P29353 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHC1P29353 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms