Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AP003385.6-201ENST00000531603 374 ntBASIC4.45□□□□□ -1.7
XPAP23025 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.45□□□□□ -1.7
XPAP23025 GLYCAM1-201ENST00000546596 285 ntBASIC4.45□□□□□ -1.7
XPAP23025 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.45□□□□□ -1.7
XPAP23025 AC018638.8-201ENST00000588755 281 ntBASIC4.45□□□□□ -1.7
XPAP23025 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
XPAP23025 AL355812.1-201ENST00000603215 216 ntBASIC4.45□□□□□ -1.7
XPAP23025 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.45□□□□□ -1.7
XPAP23025 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.45□□□□□ -1.7
XPAP23025 AC100810.6-201ENST00000638068 285 ntBASIC4.45□□□□□ -1.7
XPAP23025 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.45□□□□□ -1.7
XPAP23025 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
XPAP23025 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.45□□□□□ -1.7
XPAP23025 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.45□□□□□ -1.7
XPAP23025 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 NACAP2-201ENST00000318548 624 ntBASIC4.44□□□□□ -1.7
XPAP23025 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
XPAP23025 Y_RNA.529-201ENST00000384586 119 ntBASIC4.44□□□□□ -1.7
XPAP23025 RNU6-606P-201ENST00000384721 111 ntBASIC4.44□□□□□ -1.7
XPAP23025 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
XPAP23025 RPL32P23-201ENST00000397237 405 ntBASIC4.44□□□□□ -1.7
XPAP23025 AL136116.1-201ENST00000403591 381 ntBASIC4.44□□□□□ -1.7
XPAP23025 RNA5SP118-201ENST00000410385 109 ntBASIC4.44□□□□□ -1.7
XPAP23025 RNU4-25P-201ENST00000410569 230 ntBASIC4.44□□□□□ -1.7
XPAP23025 RNA5SP107-201ENST00000411358 122 ntBASIC4.44□□□□□ -1.7
XPAP23025 RAB28P1-201ENST00000411517 641 ntBASIC4.44□□□□□ -1.7
XPAP23025 EI24P1-201ENST00000416584 867 ntBASIC4.44□□□□□ -1.7
XPAP23025 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 ELOCP18-201ENST00000434209 337 ntBASIC4.44□□□□□ -1.7
XPAP23025 MRPS18BP2-201ENST00000434310 759 ntBASIC4.44□□□□□ -1.7
XPAP23025 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 HMGN2P21-201ENST00000447764 270 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC073415.1-201ENST00000449240 153 ntBASIC4.44□□□□□ -1.7
XPAP23025 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.44□□□□□ -1.7
XPAP23025 MTND1P9-201ENST00000453775 944 ntBASIC4.44□□□□□ -1.7
XPAP23025 RPS23P7-201ENST00000466210 444 ntBASIC4.44□□□□□ -1.7
XPAP23025 RN7SL303P-201ENST00000469773 251 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC109327.1-201ENST00000471666 403 ntBASIC4.44□□□□□ -1.7
XPAP23025 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.44□□□□□ -1.7
XPAP23025 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 AC134698.5-201ENST00000519444 336 ntBASIC4.44□□□□□ -1.7
XPAP23025 SUMO2P20-201ENST00000520803 283 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC011979.2-201ENST00000527568 352 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.44□□□□□ -1.7
XPAP23025 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.44□□□□□ -1.7
XPAP23025 MIR4293-201ENST00000584305 78 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC011712.1-201ENST00000588959 234 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.44□□□□□ -1.7
XPAP23025 AC005261.5-201ENST00000596280 355 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC113403.1-201ENST00000604910 193 ntBASIC4.44□□□□□ -1.7
XPAP23025 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.44□□□□□ -1.7
XPAP23025 AC004825.2-201ENST00000616634 455 ntBASIC4.44□□□□□ -1.7
XPAP23025 uc_338.13-201ENST00000618243 179 ntBASIC4.44□□□□□ -1.7
XPAP23025 AL713922.2-201ENST00000619384 716 ntBASIC4.44□□□□□ -1.7
XPAP23025 AC099654.10-201ENST00000640395 161 ntBASIC4.44□□□□□ -1.7
XPAP23025 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 AP001486.2-201ENST00000561652 5113 ntBASIC4.44□□□□□ -1.7
XPAP23025 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.44□□□□□ -1.7
XPAP23025 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.44□□□□□ -1.7
XPAP23025 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
XPAP23025 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.43□□□□□ -1.7
XPAP23025 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
XPAP23025 Y_RNA.11-201ENST00000362375 109 ntBASIC4.43□□□□□ -1.7
XPAP23025 RNU4-48P-201ENST00000365559 182 ntBASIC4.43□□□□□ -1.7
XPAP23025 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
XPAP23025 RNU6-837P-201ENST00000391056 108 ntBASIC4.43□□□□□ -1.7
XPAP23025 RNU6-332P-201ENST00000391193 108 ntBASIC4.43□□□□□ -1.7
XPAP23025 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
XPAP23025 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 PDCL2P1-201ENST00000419302 352 ntBASIC4.43□□□□□ -1.7
XPAP23025 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 OR2AS1P-201ENST00000427827 319 ntBASIC4.43□□□□□ -1.7
XPAP23025 ATP5JP1-201ENST00000431631 322 ntBASIC4.43□□□□□ -1.7
XPAP23025 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 AC005094.1-201ENST00000440420 368 ntBASIC4.43□□□□□ -1.7
XPAP23025 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.43□□□□□ -1.7
XPAP23025 DDX3P2-201ENST00000446138 111 ntBASIC4.43□□□□□ -1.7
XPAP23025 DHFRP3-201ENST00000455595 559 ntBASIC4.43□□□□□ -1.7
XPAP23025 RPL23AP65-201ENST00000475608 468 ntBASIC4.43□□□□□ -1.7
XPAP23025 AL163973.1-201ENST00000484753 577 ntBASIC4.43□□□□□ -1.7
XPAP23025 NIPA2P2-201ENST00000496376 1083 ntBASIC4.43□□□□□ -1.7
XPAP23025 PARP4P3-201ENST00000510265 317 ntBASIC4.43□□□□□ -1.7
XPAP23025 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 RNA5SP464-201ENST00000516251 108 ntBASIC4.43□□□□□ -1.7
XPAP23025 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.43□□□□□ -1.7
XPAP23025 FAM60DP-201ENST00000524174 632 ntBASIC4.43□□□□□ -1.7
XPAP23025 DEFB108D-201ENST00000527787 222 ntBASIC4.43□□□□□ -1.7
XPAP23025 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.43□□□□□ -1.7
XPAP23025 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
XPAP23025 AC023050.3-201ENST00000541142 333 ntBASIC4.43□□□□□ -1.7
XPAP23025 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.43□□□□□ -1.7
XPAP23025 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms