Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 AC004696.1-201ENST00000614345 607 ntBASIC2.49□□□□□ -2.01
USF1P22415 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
USF1P22415 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
USF1P22415 FAM35BP-202ENST00000497389 3337 ntBASIC2.48□□□□□ -2.01
USF1P22415 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.48□□□□□ -2.01
USF1P22415 AC008568.2-201ENST00000623862 2313 ntBASIC2.48□□□□□ -2.01
USF1P22415 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USF1P22415 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
USF1P22415 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USF1P22415 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USF1P22415 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USF1P22415 SNRPEP3-201ENST00000338402 276 ntBASIC2.48□□□□□ -2.01
USF1P22415 FTLP6-201ENST00000355274 422 ntBASIC2.48□□□□□ -2.01
USF1P22415 MIR449A-201ENST00000362113 91 ntBASIC2.48□□□□□ -2.01
USF1P22415 RNU6-216P-201ENST00000363282 104 ntBASIC2.48□□□□□ -2.01
USF1P22415 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
USF1P22415 RNU2-43P-201ENST00000410306 190 ntBASIC2.48□□□□□ -2.01
USF1P22415 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
USF1P22415 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.48□□□□□ -2.01
USF1P22415 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AL645937.1-202ENST00000421799 937 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.48□□□□□ -2.01
USF1P22415 AL590233.1-201ENST00000430017 456 ntBASIC2.48□□□□□ -2.01
USF1P22415 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.48□□□□□ -2.01
USF1P22415 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AC092427.1-201ENST00000439177 601 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.48□□□□□ -2.01
USF1P22415 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.48□□□□□ -2.01
USF1P22415 RPL23AP58-201ENST00000440453 469 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 OFD1P3Y-201ENST00000453312 783 ntBASIC2.48□□□□□ -2.01
USF1P22415 RN7SL499P-201ENST00000481141 276 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC092902.1-201ENST00000486999 259 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AC010486.1-201ENST00000511793 424 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.48□□□□□ -2.01
USF1P22415 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AP003102.1-201ENST00000525638 661 ntBASIC2.48□□□□□ -2.01
USF1P22415 NDUFS5P6-201ENST00000529136 295 ntBASIC2.48□□□□□ -2.01
USF1P22415 DEFB130C-202ENST00000530001 230 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC092451.2-201ENST00000538746 658 ntBASIC2.48□□□□□ -2.01
USF1P22415 HSPE1P3-201ENST00000559254 309 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AC138761.3-201ENST00000579993 334 ntBASIC2.48□□□□□ -2.01
USF1P22415 MIR4637-201ENST00000582405 84 ntBASIC2.48□□□□□ -2.01
USF1P22415 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.48□□□□□ -2.01
USF1P22415 AL390838.2-201ENST00000602394 274 ntBASIC2.48□□□□□ -2.01
USF1P22415 NUTF2P8-201ENST00000604593 363 ntBASIC2.48□□□□□ -2.01
USF1P22415 RPL21P136-201ENST00000605378 396 ntBASIC2.48□□□□□ -2.01
USF1P22415 AP000254.1-201ENST00000609934 520 ntBASIC2.48□□□□□ -2.01
USF1P22415 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.48□□□□□ -2.01
USF1P22415 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USF1P22415 AC097714.1-201ENST00000511272 1647 ntBASIC2.48□□□□□ -2.01
USF1P22415 AC087359.1-201ENST00000508335 1740 ntBASIC2.48□□□□□ -2.01
USF1P22415 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USF1P22415 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USF1P22415 AC107982.1-201ENST00000507171 1300 ntBASIC2.47□□□□□ -2.01
USF1P22415 AL136360.1-201ENST00000503377 1900 ntBASIC2.47□□□□□ -2.01
USF1P22415 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.47□□□□□ -2.01
USF1P22415 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USF1P22415 MTCO1P56-201ENST00000401674 224 ntBASIC2.47□□□□□ -2.01
USF1P22415 RNA5SP80-201ENST00000410475 111 ntBASIC2.47□□□□□ -2.01
USF1P22415 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC019070.1-201ENST00000415008 1024 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.47□□□□□ -2.01
USF1P22415 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.47□□□□□ -2.01
USF1P22415 ATG3P1-201ENST00000419507 911 ntBASIC2.47□□□□□ -2.01
USF1P22415 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.47□□□□□ -2.01
USF1P22415 AC007742.1-201ENST00000425789 329 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC234781.2-201ENST00000426370 994 ntBASIC2.47□□□□□ -2.01
USF1P22415 AL390023.1-201ENST00000428836 262 ntBASIC2.47□□□□□ -2.01
USF1P22415 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.47□□□□□ -2.01
USF1P22415 ELOCP26-201ENST00000436067 329 ntBASIC2.47□□□□□ -2.01
USF1P22415 UBBP3-201ENST00000445497 241 ntBASIC2.47□□□□□ -2.01
USF1P22415 AL592447.1-201ENST00000447592 540 ntBASIC2.47□□□□□ -2.01
USF1P22415 AL353691.1-201ENST00000451332 387 ntBASIC2.47□□□□□ -2.01
USF1P22415 RN7SL429P-201ENST00000479090 223 ntBASIC2.47□□□□□ -2.01
USF1P22415 RN7SL489P-201ENST00000486185 223 ntBASIC2.47□□□□□ -2.01
USF1P22415 RN7SL327P-201ENST00000488659 223 ntBASIC2.47□□□□□ -2.01
USF1P22415 RN7SL633P-201ENST00000488974 297 ntBASIC2.47□□□□□ -2.01
USF1P22415 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USF1P22415 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.47□□□□□ -2.01
USF1P22415 AC006445.2-201ENST00000510061 472 ntBASIC2.47□□□□□ -2.01
USF1P22415 RNU6-467P-201ENST00000517027 110 ntBASIC2.47□□□□□ -2.01
USF1P22415 HSPA8P13-201ENST00000523715 472 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC090695.1-201ENST00000561269 1222 ntBASIC2.47□□□□□ -2.01
USF1P22415 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.47□□□□□ -2.01
USF1P22415 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.47□□□□□ -2.01
USF1P22415 DUXAP4-201ENST00000603046 613 ntBASIC2.47□□□□□ -2.01
USF1P22415 DUXAP11-201ENST00000603858 526 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC124016.2-201ENST00000610058 665 ntBASIC2.47□□□□□ -2.01
USF1P22415 RN7SL853P-201ENST00000617250 223 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC253576.2-201ENST00000618815 580 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC011330.2-201ENST00000621680 635 ntBASIC2.47□□□□□ -2.01
USF1P22415 AC027309.3-201ENST00000623419 351 ntBASIC2.47□□□□□ -2.01
USF1P22415 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms