Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL603758.1-201ENST00000618654 241 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 MIR4275-201ENST00000636486 87 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AP000526.1-201ENST00000603308 1388 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AP003122.5-201ENST00000527668 3766 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC099786.3-201ENST00000565735 1410 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RNU6-637P-201ENST00000384050 107 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL357075.1-201ENST00000404107 726 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 SNORA11.1-201ENST00000408133 129 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RNA5SP120-201ENST00000410900 112 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 USP9YP33-201ENST00000412220 421 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RPL32P35-201ENST00000415214 394 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC006960.1-201ENST00000419980 153 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL513175.2-201ENST00000422071 443 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL512844.2-201ENST00000433990 593 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 USP9YP35-201ENST00000435696 412 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 SNRPEP7-201ENST00000438350 220 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 MTND2P39-201ENST00000457230 764 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC108729.1-201ENST00000487812 947 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RNU1-143P-201ENST00000516296 146 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AMZ2P1-203ENST00000565833 850 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 HMGB1P6-201ENST00000569046 646 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC034268.2-201ENST00000571784 482 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 TMF1P1-201ENST00000576058 373 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 DUXAP4-201ENST00000603046 613 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 U73023.1-201ENST00000603134 700 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AL157392.4-201ENST00000609756 345 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 U1.23-201ENST00000610293 146 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 RNU1-68P-201ENST00000615382 146 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 U1.39-201ENST00000621562 146 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 AC092435.3-201ENST00000565538 3654 ntBASIC3.22□□□□□ -1.89
HLA-DPA1P20036 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DPA1P20036 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.89
HLA-DPA1P20036 AC011477.1-204ENST00000623416 1325 ntBASIC3.21□□□□□ -1.89
HLA-DPA1P20036 AC073346.2-201ENST00000624724 2058 ntBASIC3.21□□□□□ -1.89
HLA-DPA1P20036 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 RNU6-289P-201ENST00000364093 107 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 RNU6-270P-201ENST00000364131 105 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 TPMTP3-201ENST00000411928 735 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AL109741.2-201ENST00000455561 343 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 BX510359.1-201ENST00000456973 237 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 RN7SL807P-201ENST00000470923 297 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AL135752.1-201ENST00000479477 471 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 DSTNP2-201ENST00000504533 515 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC024589.1-201ENST00000512207 263 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 RNU6-1282P-201ENST00000516735 96 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 RNU6-840P-201ENST00000517275 65 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AP003497.1-201ENST00000528472 562 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC079597.1-201ENST00000624306 508 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
HLA-DPA1P20036 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 DDX43P2-201ENST00000604753 1354 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms