Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC108078.1-201ENST00000508073 725 ntBASIC1.63□□□□□ -2.15
TPRP12270 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.63□□□□□ -2.15
TPRP12270 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TPRP12270 RNU1-22P-201ENST00000363334 158 ntBASIC1.62□□□□□ -2.15
TPRP12270 Y_RNA.274-201ENST00000364714 101 ntBASIC1.62□□□□□ -2.15
TPRP12270 MIR216A-201ENST00000385063 110 ntBASIC1.62□□□□□ -2.15
TPRP12270 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TPRP12270 FNDC3CP-201ENST00000420795 1155 ntBASIC1.62□□□□□ -2.15
TPRP12270 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.62□□□□□ -2.15
TPRP12270 AP002345.1-201ENST00000456493 928 ntBASIC1.62□□□□□ -2.15
TPRP12270 RPS3AP22-201ENST00000488297 769 ntBASIC1.62□□□□□ -2.15
TPRP12270 AC090255.1-201ENST00000495779 349 ntBASIC1.62□□□□□ -2.15
TPRP12270 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.62□□□□□ -2.15
TPRP12270 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.62□□□□□ -2.15
TPRP12270 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.62□□□□□ -2.15
TPRP12270 AL627309.6-201ENST00000606857 840 ntBASIC1.62□□□□□ -2.15
TPRP12270 HPVC1-201ENST00000629899 1198 ntBASIC1.62□□□□□ -2.15
TPRP12270 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TPRP12270 AC244517.1-201ENST00000606030 2086 ntBASIC1.62□□□□□ -2.15
TPRP12270 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TPRP12270 U3.15-201ENST00000365398 212 ntBASIC1.62□□□□□ -2.15
TPRP12270 AL121972.1-201ENST00000402023 252 ntBASIC1.62□□□□□ -2.15
TPRP12270 SRIP3-201ENST00000413200 219 ntBASIC1.62□□□□□ -2.15
TPRP12270 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.62□□□□□ -2.15
TPRP12270 COX6CP5-201ENST00000527162 228 ntBASIC1.62□□□□□ -2.15
TPRP12270 MTATP6P3-201ENST00000581686 676 ntBASIC1.62□□□□□ -2.15
TPRP12270 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.62□□□□□ -2.15
TPRP12270 AC000123.2-201ENST00000623124 461 ntBASIC1.62□□□□□ -2.15
TPRP12270 AC008133.2-201ENST00000624540 351 ntBASIC1.62□□□□□ -2.15
TPRP12270 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.62□□□□□ -2.15
TPRP12270 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
TPRP12270 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.62□□□□□ -2.15
TPRP12270 AC025263.3-201ENST00000622965 1396 ntBASIC1.61□□□□□ -2.15
TPRP12270 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.61□□□□□ -2.15
TPRP12270 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.61□□□□□ -2.15
TPRP12270 ARL5AP3-201ENST00000439327 386 ntBASIC1.61□□□□□ -2.15
TPRP12270 ATG10-AS1-201ENST00000504846 648 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC036111.3-201ENST00000526389 112 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC091488.1-201ENST00000604239 660 ntBASIC1.61□□□□□ -2.15
TPRP12270 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.61□□□□□ -2.15
TPRP12270 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 MIR193B-201ENST00000384907 83 ntBASIC1.61□□□□□ -2.15
TPRP12270 POLHP1-201ENST00000411806 470 ntBASIC1.61□□□□□ -2.15
TPRP12270 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 USP9YP27-201ENST00000418455 438 ntBASIC1.61□□□□□ -2.15
TPRP12270 PAICSP7-201ENST00000419829 962 ntBASIC1.61□□□□□ -2.15
TPRP12270 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.61□□□□□ -2.15
TPRP12270 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 CALM1P1-201ENST00000442082 433 ntBASIC1.61□□□□□ -2.15
TPRP12270 HMGB1P26-201ENST00000452520 628 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.61□□□□□ -2.15
TPRP12270 RPS15AP36-201ENST00000492022 382 ntBASIC1.61□□□□□ -2.15
TPRP12270 RNU6-1334P-201ENST00000516032 105 ntBASIC1.61□□□□□ -2.15
TPRP12270 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.61□□□□□ -2.15
TPRP12270 AC068135.2-201ENST00000569293 1028 ntBASIC1.61□□□□□ -2.15
TPRP12270 MIR5000-201ENST00000577717 103 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC083899.3-201ENST00000603413 594 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC011472.4-201ENST00000615848 491 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC025016.1-201ENST00000616746 682 ntBASIC1.61□□□□□ -2.15
TPRP12270 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TPRP12270 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TPRP12270 MTND5P7-201ENST00000413558 1798 ntBASIC1.6□□□□□ -2.15
TPRP12270 Y_RNA.390-201ENST00000383932 102 ntBASIC1.6□□□□□ -2.15
TPRP12270 EBAG9P1-201ENST00000418955 543 ntBASIC1.6□□□□□ -2.15
TPRP12270 AMD1P1-201ENST00000457220 922 ntBASIC1.6□□□□□ -2.15
TPRP12270 SNRPGP3-201ENST00000469405 227 ntBASIC1.6□□□□□ -2.15
TPRP12270 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TPRP12270 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.6□□□□□ -2.15
TPRP12270 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.6□□□□□ -2.15
TPRP12270 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.6□□□□□ -2.15
TPRP12270 RPS3AP23-202ENST00000574601 686 ntBASIC1.6□□□□□ -2.15
TPRP12270 AC090970.3-201ENST00000612566 866 ntBASIC1.6□□□□□ -2.15
TPRP12270 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.6□□□□□ -2.15
TPRP12270 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
TPRP12270 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
TPRP12270 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TPRP12270 DHFRP5-201ENST00000406944 564 ntBASIC1.59□□□□□ -2.15
TPRP12270 AC007390.1-201ENST00000415722 356 ntBASIC1.59□□□□□ -2.15
TPRP12270 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.59□□□□□ -2.15
TPRP12270 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.59□□□□□ -2.15
TPRP12270 DYNLL1P5-201ENST00000467158 270 ntBASIC1.59□□□□□ -2.15
TPRP12270 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TPRP12270 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.59□□□□□ -2.15
TPRP12270 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.59□□□□□ -2.15
TPRP12270 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
TPRP12270 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.59□□□□□ -2.15
TPRP12270 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
TPRP12270 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.59□□□□□ -2.15
TPRP12270 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.59□□□□□ -2.15
TPRP12270 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TPRP12270 NUP58P1-201ENST00000502546 1738 ntBASIC1.59□□□□□ -2.15
TPRP12270 XKRYP4-201ENST00000414395 483 ntBASIC1.59□□□□□ -2.16
TPRP12270 TOMM22P1-201ENST00000418578 312 ntBASIC1.59□□□□□ -2.16
TPRP12270 RPL39P40-201ENST00000445481 146 ntBASIC1.59□□□□□ -2.16
TPRP12270 XKRYP5-201ENST00000449659 483 ntBASIC1.59□□□□□ -2.16
TPRP12270 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.59□□□□□ -2.16
TPRP12270 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.59□□□□□ -2.16
TPRP12270 RNA5SP121-201ENST00000516537 101 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms