Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 HMGN2P6-201ENST00000551091 273 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AC020910.2-201ENST00000603635 610 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC015813.4-201ENST00000610469 179 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 MIR7155-201ENST00000615925 56 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AC091905.4-201ENST00000623432 202 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AP002799.1-201ENST00000623552 423 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC055839.1-201ENST00000634467 498 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC121333.1-201ENST00000567488 2709 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.61□□□□□ -1.67
COL6A2P12110 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 AL137003.2-201ENST00000606924 2538 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 RNA5SP305-201ENST00000362665 119 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RNU6-82P-201ENST00000363970 107 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 Y_RNA.315-201ENST00000365117 102 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 SNORA24.1-201ENST00000384401 135 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 AL133270.1-201ENST00000402635 279 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RN7SKP159-201ENST00000410657 292 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RN7SKP213-201ENST00000410746 298 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 AC092447.6-201ENST00000414578 210 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RPL7L1P10-201ENST00000427790 463 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AC018644.1-201ENST00000429934 551 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.6□□□□□ -1.67
COL6A2P12110 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.6□□□□□ -1.67
COL6A2P12110 CEACAMP7-201ENST00000444105 496 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AL162395.1-201ENST00000457882 422 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.6□□□□□ -1.67
COL6A2P12110 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 RNU6-1208P-201ENST00000459588 107 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RN7SL329P-201ENST00000467740 299 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 HMGN1P10-201ENST00000474557 553 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 RNU6-864P-201ENST00000516256 108 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AP003072.1-201ENST00000531740 145 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AL137161.1-201ENST00000532231 390 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.6□□□□□ -1.67
COL6A2P12110 AL121821.2-201ENST00000556081 394 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.6□□□□□ -1.67
COL6A2P12110 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.6□□□□□ -1.67
COL6A2P12110 MIR6748-201ENST00000610433 71 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 uc_338.34-201ENST00000617467 174 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 SNHG22-203ENST00000617833 660 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 AL133216.2-202ENST00000634512 349 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 AC103710.2-202ENST00000641454 2853 ntBASIC4.6□□□□□ -1.67
COL6A2P12110 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL6A2P12110 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.6□□□□□ -1.67
COL6A2P12110 AC125257.1-201ENST00000560400 2930 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
COL6A2P12110 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COL6A2P12110 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL6A2P12110 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL6A2P12110 Y_RNA.167-201ENST00000363735 109 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL6A2P12110 RNU6-1013P-201ENST00000384180 107 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 SOD2P1-201ENST00000396543 562 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AL645927.1-201ENST00000396783 406 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 GLULP6-201ENST00000399502 913 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AL583835.1-201ENST00000399570 407 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 RN7SKP267-201ENST00000410381 285 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 GABPAP-201ENST00000419271 1356 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AC093162.1-201ENST00000419682 124 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 AL391219.1-201ENST00000422570 483 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 MRPS18BP2-201ENST00000434310 759 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 snoU13.3-201ENST00000459441 104 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 SNORD19B-201ENST00000459623 84 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 RPL7AP6-201ENST00000477943 801 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 RN7SL826P-201ENST00000479724 288 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 IRF5P1-201ENST00000504852 2164 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms