Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TMSB4XP8-201ENST00000402089 135 ntBASIC2.69□□□□□ -1.98
TPM1P09493 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TPM1P09493 TMSB4XP6-201ENST00000415187 135 ntBASIC2.69□□□□□ -1.98
TPM1P09493 TMSB4XP1-201ENST00000424567 135 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AL358075.3-201ENST00000426289 226 ntBASIC2.69□□□□□ -1.98
TPM1P09493 MTCYBP3-201ENST00000445588 1137 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM1P09493 MTND4LP3-201ENST00000468320 276 ntBASIC2.69□□□□□ -1.98
TPM1P09493 RPL23AP45-201ENST00000476406 468 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.69□□□□□ -1.98
TPM1P09493 AC113155.1-201ENST00000511141 769 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AC112673.1-201ENST00000513168 575 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AP003467.2-201ENST00000520175 319 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AC079600.2-201ENST00000550076 130 ntBASIC2.69□□□□□ -1.98
TPM1P09493 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.69□□□□□ -1.98
TPM1P09493 RPL23AP84-201ENST00000571193 464 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM1P09493 AP005137.2-201ENST00000609238 400 ntBASIC2.69□□□□□ -1.98
TPM1P09493 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM1P09493 AC079395.3-201ENST00000615161 484 ntBASIC2.69□□□□□ -1.98
TPM1P09493 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
TPM1P09493 AC090772.4-201ENST00000623599 362 ntBASIC2.69□□□□□ -1.98
TPM1P09493 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
TPM1P09493 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.69□□□□□ -1.98
TPM1P09493 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 AL022578.1-201ENST00000439330 1433 ntBASIC2.68□□□□□ -1.98
TPM1P09493 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 RPL21P132-201ENST00000331267 462 ntBASIC2.68□□□□□ -1.98
TPM1P09493 RNU6-1035P-201ENST00000384477 107 ntBASIC2.68□□□□□ -1.98
TPM1P09493 MIR135A2-201ENST00000384854 100 ntBASIC2.68□□□□□ -1.98
TPM1P09493 U3.20-201ENST00000390909 217 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
TPM1P09493 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.68□□□□□ -1.98
TPM1P09493 RPS15AP27-201ENST00000449183 343 ntBASIC2.68□□□□□ -1.98
TPM1P09493 snoU13.22-201ENST00000459428 104 ntBASIC2.68□□□□□ -1.98
TPM1P09493 RPL32P14-201ENST00000463196 378 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.68□□□□□ -1.98
TPM1P09493 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.68□□□□□ -1.98
TPM1P09493 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.68□□□□□ -1.98
TPM1P09493 RNU5A-7P-201ENST00000515979 116 ntBASIC2.68□□□□□ -1.98
TPM1P09493 HMGB1P1-201ENST00000522557 636 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 CR383656.7-201ENST00000548164 174 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.68□□□□□ -1.98
TPM1P09493 AC068135.2-201ENST00000569293 1028 ntBASIC2.68□□□□□ -1.98
TPM1P09493 MIR4429-201ENST00000580105 73 ntBASIC2.68□□□□□ -1.98
TPM1P09493 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AL161756.2-201ENST00000604597 246 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC245100.7-201ENST00000609678 442 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC073308.1-201ENST00000623696 305 ntBASIC2.68□□□□□ -1.98
TPM1P09493 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.68□□□□□ -1.98
TPM1P09493 OR5H6-203ENST00000642105 978 ntBASIC2.68□□□□□ -1.98
TPM1P09493 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
TPM1P09493 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
TPM1P09493 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM1P09493 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TPM1P09493 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.67□□□□□ -1.98
TPM1P09493 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM1P09493 SNORA44-201ENST00000384584 132 ntBASIC2.67□□□□□ -1.98
TPM1P09493 SNORD65C-201ENST00000390962 71 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
TPM1P09493 RNU2-43P-201ENST00000410306 190 ntBASIC2.67□□□□□ -1.98
TPM1P09493 RNU2-47P-201ENST00000410649 186 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.67□□□□□ -1.98
TPM1P09493 AC008173.1-201ENST00000418901 264 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.67□□□□□ -1.98
TPM1P09493 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TPM1P09493 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC105272.1-201ENST00000438604 198 ntBASIC2.67□□□□□ -1.98
TPM1P09493 ELOCP3-201ENST00000439303 348 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.67□□□□□ -1.98
TPM1P09493 MTND3P4-201ENST00000453537 303 ntBASIC2.67□□□□□ -1.98
TPM1P09493 CDC42P1-201ENST00000456658 548 ntBASIC2.67□□□□□ -1.98
TPM1P09493 RPL21P47-201ENST00000483696 477 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM1P09493 AC114322.1-201ENST00000506771 926 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM1P09493 MRPS36P2-201ENST00000512569 299 ntBASIC2.67□□□□□ -1.98
TPM1P09493 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
TPM1P09493 COX6CP5-201ENST00000527162 228 ntBASIC2.67□□□□□ -1.98
TPM1P09493 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TPM1P09493 AC008127.2-201ENST00000549925 1075 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM1P09493 TRAV28-201ENST00000557548 323 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC093519.1-201ENST00000566109 298 ntBASIC2.67□□□□□ -1.98
TPM1P09493 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM1P09493 AL031176.1-201ENST00000604554 466 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC007619.2-201ENST00000605743 379 ntBASIC2.67□□□□□ -1.98
TPM1P09493 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM1P09493 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TPM1P09493 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TPM1P09493 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TPM1P09493 RNU6-582P-201ENST00000362989 107 ntBASIC2.66□□□□□ -1.98
TPM1P09493 RNU1-51P-201ENST00000365345 176 ntBASIC2.66□□□□□ -1.98
TPM1P09493 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TPM1P09493 NPM1P10-201ENST00000398310 865 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms