Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CDC27P3-201ENST00000635418 1910 ntBASIC0.99□□□□□ -2.25
APOBP04114 MIR598-201ENST00000384868 97 ntBASIC0.99□□□□□ -2.25
APOBP04114 RWDD4P2-201ENST00000426392 563 ntBASIC0.99□□□□□ -2.25
APOBP04114 USP9YP7-201ENST00000436723 430 ntBASIC0.99□□□□□ -2.25
APOBP04114 AL031659.1-201ENST00000447075 539 ntBASIC0.99□□□□□ -2.25
APOBP04114 RPL23AP20-201ENST00000447965 421 ntBASIC0.99□□□□□ -2.25
APOBP04114 USP9YP32-201ENST00000452432 430 ntBASIC0.99□□□□□ -2.25
APOBP04114 RWDD4P1-201ENST00000488019 565 ntBASIC0.99□□□□□ -2.25
APOBP04114 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AP001804.3-201ENST00000525146 880 ntBASIC0.99□□□□□ -2.25
APOBP04114 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.99□□□□□ -2.25
APOBP04114 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.99□□□□□ -2.25
APOBP04114 MIR3660-201ENST00000584845 100 ntBASIC0.99□□□□□ -2.25
APOBP04114 AC068944.2-201ENST00000610373 403 ntBASIC0.99□□□□□ -2.25
APOBP04114 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
APOBP04114 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
APOBP04114 MTCO1P14-201ENST00000441695 1559 ntBASIC0.99□□□□□ -2.25
APOBP04114 SNORA31-201ENST00000362607 130 ntBASIC0.99□□□□□ -2.25
APOBP04114 RNU6-178P-201ENST00000384631 104 ntBASIC0.99□□□□□ -2.25
APOBP04114 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.99□□□□□ -2.25
APOBP04114 MAGOH2P-202ENST00000584384 429 ntBASIC0.99□□□□□ -2.25
APOBP04114 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AC006026.1-201ENST00000444025 1803 ntBASIC0.99□□□□□ -2.25
APOBP04114 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AC007390.1-201ENST00000415722 356 ntBASIC0.99□□□□□ -2.25
APOBP04114 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.99□□□□□ -2.25
APOBP04114 AC005517.2-201ENST00000424673 553 ntBASIC0.99□□□□□ -2.25
APOBP04114 HMGB1P26-201ENST00000452520 628 ntBASIC0.99□□□□□ -2.25
APOBP04114 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.98□□□□□ -2.25
APOBP04114 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 MTND1P18-201ENST00000448191 573 ntBASIC0.98□□□□□ -2.25
APOBP04114 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC0.98□□□□□ -2.25
APOBP04114 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC0.98□□□□□ -2.25
APOBP04114 ABI1P1-201ENST00000603375 1120 ntBASIC0.98□□□□□ -2.25
APOBP04114 VN1R74P-201ENST00000613259 503 ntBASIC0.98□□□□□ -2.25
APOBP04114 MIR591-201ENST00000385290 95 ntBASIC0.98□□□□□ -2.25
APOBP04114 AL513185.2-201ENST00000425543 193 ntBASIC0.98□□□□□ -2.25
APOBP04114 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 RPL23AP62-201ENST00000463396 453 ntBASIC0.98□□□□□ -2.25
APOBP04114 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
APOBP04114 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC0.98□□□□□ -2.25
APOBP04114 RNA5SP402-201ENST00000517148 110 ntBASIC0.98□□□□□ -2.25
APOBP04114 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.98□□□□□ -2.25
APOBP04114 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
APOBP04114 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.98□□□□□ -2.25
APOBP04114 AL109741.2-201ENST00000455561 343 ntBASIC0.98□□□□□ -2.25
APOBP04114 MTCYBP18-201ENST00000501056 747 ntBASIC0.98□□□□□ -2.25
APOBP04114 FABP5P6-201ENST00000510588 409 ntBASIC0.98□□□□□ -2.25
APOBP04114 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
APOBP04114 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
APOBP04114 AC016877.3-201ENST00000606778 504 ntBASIC0.98□□□□□ -2.25
APOBP04114 AC073348.1-201ENST00000623002 331 ntBASIC0.98□□□□□ -2.25
APOBP04114 AC093084.1-201ENST00000424233 687 ntBASIC0.98□□□□□ -2.25
APOBP04114 GTF2IP7-202ENST00000436677 309 ntBASIC0.98□□□□□ -2.25
APOBP04114 AC004223.1-201ENST00000479840 271 ntBASIC0.98□□□□□ -2.25
APOBP04114 AC087190.1-201ENST00000484462 480 ntBASIC0.98□□□□□ -2.25
APOBP04114 MTCYBP35-201ENST00000503630 1137 ntBASIC0.98□□□□□ -2.25
APOBP04114 AL137100.2-201ENST00000555786 315 ntBASIC0.98□□□□□ -2.25
APOBP04114 MIR4419B-201ENST00000577260 68 ntBASIC0.98□□□□□ -2.25
APOBP04114 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.98□□□□□ -2.25
APOBP04114 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
APOBP04114 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
APOBP04114 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
APOBP04114 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
APOBP04114 RNU6-1032P-201ENST00000384100 107 ntBASIC0.97□□□□□ -2.25
APOBP04114 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC0.97□□□□□ -2.25
APOBP04114 AC005912.1-201ENST00000495392 255 ntBASIC0.97□□□□□ -2.25
APOBP04114 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
APOBP04114 AC093767.1-201ENST00000504523 156 ntBASIC0.97□□□□□ -2.25
APOBP04114 SNORA31.26-201ENST00000517250 137 ntBASIC0.97□□□□□ -2.25
APOBP04114 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.97□□□□□ -2.25
APOBP04114 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.97□□□□□ -2.25
APOBP04114 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
APOBP04114 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.97□□□□□ -2.25
APOBP04114 AL078603.1-201ENST00000603824 313 ntBASIC0.97□□□□□ -2.25
APOBP04114 SNORA16.1-201ENST00000364597 132 ntBASIC0.97□□□□□ -2.25
APOBP04114 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
APOBP04114 RN7SKP101-201ENST00000411376 320 ntBASIC0.97□□□□□ -2.25
APOBP04114 HMGN2P18-201ENST00000450680 270 ntBASIC0.97□□□□□ -2.25
APOBP04114 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.97□□□□□ -2.25
APOBP04114 AC008571.1-201ENST00000467232 300 ntBASIC0.97□□□□□ -2.25
APOBP04114 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.97□□□□□ -2.25
APOBP04114 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.97□□□□□ -2.25
APOBP04114 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.97□□□□□ -2.25
APOBP04114 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.25
APOBP04114 MIR320A-201ENST00000385302 82 ntBASIC0.96□□□□□ -2.26
APOBP04114 DNAJC19P6-201ENST00000401853 280 ntBASIC0.96□□□□□ -2.26
APOBP04114 BX510359.4-201ENST00000423750 193 ntBASIC0.96□□□□□ -2.26
APOBP04114 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 AC092155.2-201ENST00000454675 477 ntBASIC0.96□□□□□ -2.26
APOBP04114 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.96□□□□□ -2.26
APOBP04114 RNA5SP436-201ENST00000516020 115 ntBASIC0.96□□□□□ -2.26
APOBP04114 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 AC124283.4-201ENST00000581815 456 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms