Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VTNP04004 MIR22-201ENST00000362190 85 ntBASIC3.39□□□□□ -1.87
VTNP04004 SNORA80A-201ENST00000363922 136 ntBASIC3.39□□□□□ -1.87
VTNP04004 Y_RNA.302-201ENST00000364997 102 ntBASIC3.39□□□□□ -1.87
VTNP04004 RNU5A-2P-201ENST00000384337 116 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC110754.1-201ENST00000399740 601 ntBASIC3.39□□□□□ -1.87
VTNP04004 AL021407.1-201ENST00000404531 386 ntBASIC3.39□□□□□ -1.87
VTNP04004 MIR320C1-201ENST00000408566 88 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.39□□□□□ -1.87
VTNP04004 PSMA6P3-201ENST00000428242 164 ntBASIC3.39□□□□□ -1.87
VTNP04004 HSPE1P28-201ENST00000443139 211 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.39□□□□□ -1.87
VTNP04004 USP9YP10-201ENST00000454868 628 ntBASIC3.39□□□□□ -1.87
VTNP04004 HMGN1P18-201ENST00000457642 277 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC010468.1-201ENST00000461022 817 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.39□□□□□ -1.87
VTNP04004 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC092045.1-201ENST00000495716 1231 ntBASIC3.39□□□□□ -1.87
VTNP04004 NIPA2P2-201ENST00000496376 1083 ntBASIC3.39□□□□□ -1.87
VTNP04004 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AC117522.2-201ENST00000510049 657 ntBASIC3.39□□□□□ -1.87
VTNP04004 MTND1P22-201ENST00000510572 951 ntBASIC3.39□□□□□ -1.87
VTNP04004 USP9YP5-201ENST00000511770 630 ntBASIC3.39□□□□□ -1.87
VTNP04004 ARL2BPP6-201ENST00000512757 439 ntBASIC3.39□□□□□ -1.87
VTNP04004 MTND5P4-201ENST00000514978 288 ntBASIC3.39□□□□□ -1.87
VTNP04004 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 OR5D17P-201ENST00000531492 978 ntBASIC3.39□□□□□ -1.87
VTNP04004 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.39□□□□□ -1.87
VTNP04004 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.39□□□□□ -1.87
VTNP04004 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.39□□□□□ -1.87
VTNP04004 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.39□□□□□ -1.87
VTNP04004 AC007687.1-201ENST00000602704 304 ntBASIC3.39□□□□□ -1.87
VTNP04004 AC025588.4-201ENST00000615802 908 ntBASIC3.39□□□□□ -1.87
VTNP04004 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.39□□□□□ -1.87
VTNP04004 PCMTD1P7-201ENST00000634506 357 ntBASIC3.39□□□□□ -1.87
VTNP04004 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VTNP04004 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.39□□□□□ -1.87
VTNP04004 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VTNP04004 AL445523.1-201ENST00000451184 1362 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC058791.1-201ENST00000608412 3198 ntBASIC3.38□□□□□ -1.87
VTNP04004 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VTNP04004 RNU6-629P-201ENST00000384061 103 ntBASIC3.38□□□□□ -1.87
VTNP04004 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
VTNP04004 RNU6-952P-201ENST00000391164 108 ntBASIC3.38□□□□□ -1.87
VTNP04004 SKINT1L-201ENST00000401057 817 ntBASIC3.38□□□□□ -1.87
VTNP04004 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.38□□□□□ -1.87
VTNP04004 AL031577.2-201ENST00000404133 280 ntBASIC3.38□□□□□ -1.87
VTNP04004 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.38□□□□□ -1.87
VTNP04004 AC006548.1-201ENST00000427470 102 ntBASIC3.38□□□□□ -1.87
VTNP04004 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.38□□□□□ -1.87
VTNP04004 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.38□□□□□ -1.87
VTNP04004 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 ZNF114P1-201ENST00000453500 292 ntBASIC3.38□□□□□ -1.87
VTNP04004 USP9YP34-201ENST00000453983 808 ntBASIC3.38□□□□□ -1.87
VTNP04004 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VTNP04004 RPL30P6-201ENST00000475925 342 ntBASIC3.38□□□□□ -1.87
VTNP04004 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
VTNP04004 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.38□□□□□ -1.87
VTNP04004 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.38□□□□□ -1.87
VTNP04004 MTCYBP41-201ENST00000528913 1123 ntBASIC3.38□□□□□ -1.87
VTNP04004 AP000889.1-201ENST00000530968 660 ntBASIC3.38□□□□□ -1.87
VTNP04004 CBX3P5-201ENST00000552017 521 ntBASIC3.38□□□□□ -1.87
VTNP04004 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.38□□□□□ -1.87
VTNP04004 H3F3AP1-201ENST00000559984 334 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.38□□□□□ -1.87
VTNP04004 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.38□□□□□ -1.87
VTNP04004 BBIP1P1-201ENST00000602999 279 ntBASIC3.38□□□□□ -1.87
VTNP04004 MTCYBP22-201ENST00000603788 447 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC105129.3-201ENST00000605455 485 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
VTNP04004 AL592295.2-201ENST00000612578 206 ntBASIC3.38□□□□□ -1.87
VTNP04004 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.38□□□□□ -1.87
VTNP04004 CR381572.1-201ENST00000625098 102 ntBASIC3.38□□□□□ -1.87
VTNP04004 SCARNA15.3-201ENST00000626315 122 ntBASIC3.38□□□□□ -1.87
VTNP04004 SCARNA4.1-201ENST00000628597 123 ntBASIC3.38□□□□□ -1.87
VTNP04004 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.38□□□□□ -1.87
VTNP04004 AC099063.3-201ENST00000642066 185 ntBASIC3.38□□□□□ -1.87
VTNP04004 MTND4P16-201ENST00000466108 1367 ntBASIC3.38□□□□□ -1.87
VTNP04004 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VTNP04004 OR4G11P-202ENST00000642116 1414 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.37□□□□□ -1.87
VTNP04004 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms