Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL3A1P02461 AL034403.1-201ENST00000399414 885 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 MTCYBP36-201ENST00000404146 440 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AL136131.1-201ENST00000406079 803 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 C1DP2-201ENST00000418167 426 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 ELOCP14-201ENST00000428070 331 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 UBE2FP3-201ENST00000436366 524 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC127537.2-201ENST00000439258 465 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 ELOCP7-201ENST00000439968 331 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.32□□□□□ -1.72
COL3A1P02461 RN7SL863P-201ENST00000462370 296 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 RPL23AP67-201ENST00000465341 474 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AP000797.1-201ENST00000478870 387 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 NIPA2P2-201ENST00000496376 1083 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC110794.1-201ENST00000505816 425 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.32□□□□□ -1.72
COL3A1P02461 AC009646.1-201ENST00000510455 318 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.32□□□□□ -1.72
COL3A1P02461 AC083923.1-201ENST00000523708 376 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC005498.1-201ENST00000592125 465 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 KC877982.1-201ENST00000602313 470 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AL137843.1-201ENST00000605078 385 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AL157817.1-201ENST00000614264 790 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.32□□□□□ -1.72
COL3A1P02461 uc_338.32-201ENST00000615087 172 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC027807.2-201ENST00000616099 408 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 AC120349.2-201ENST00000625002 298 ntBASIC4.32□□□□□ -1.72
COL3A1P02461 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.32□□□□□ -1.72
COL3A1P02461 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL3A1P02461 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.32□□□□□ -1.72
COL3A1P02461 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL3A1P02461 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL3A1P02461 Y_RNA.356-201ENST00000365475 113 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 Y_RNA.460-201ENST00000384255 102 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 AC093698.1-201ENST00000423843 571 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 AC005534.2-201ENST00000431047 433 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 RPL23AP69-201ENST00000431134 458 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.31□□□□□ -1.72
COL3A1P02461 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 RPL39P6-201ENST00000448289 150 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.31□□□□□ -1.72
COL3A1P02461 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 AP001486.1-201ENST00000463339 476 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 AC021146.1-201ENST00000511202 716 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 Y_RNA.675-201ENST00000516389 149 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 NDUFB9P3-201ENST00000521269 501 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC137800.2-201ENST00000574375 120 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.31□□□□□ -1.72
COL3A1P02461 YWHAQP7-201ENST00000603536 658 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 BNIP3P4-201ENST00000604946 565 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC008277.2-201ENST00000605196 797 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC107214.2-201ENST00000608204 634 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 MIR6852-201ENST00000621699 66 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 AC117529.2-201ENST00000512159 2068 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL3A1P02461 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL3A1P02461 AC119744.1-201ENST00000454746 1715 ntBASIC4.31□□□□□ -1.72
COL3A1P02461 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL3A1P02461 RNU6-543P-201ENST00000362576 108 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 RNU6-1227P-201ENST00000383981 107 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 RNU6-297P-201ENST00000384636 107 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 RNU2-42P-201ENST00000410697 113 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 BX679664.1-201ENST00000434429 253 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
COL3A1P02461 AL831737.1-201ENST00000441288 271 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL3A1P02461 AC019235.1-201ENST00000503847 207 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 AF235103.2-201ENST00000525753 346 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.3□□□□□ -1.72
COL3A1P02461 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.3□□□□□ -1.72
COL3A1P02461 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 MIR4325-201ENST00000583049 90 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.3□□□□□ -1.72
COL3A1P02461 AC060780.3-201ENST00000589464 80 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 AC009233.1-201ENST00000616477 371 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC010338.1-201ENST00000621823 717 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AL359880.1-201ENST00000621879 266 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC090574.1-201ENST00000623186 233 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 AC079228.1-201ENST00000624774 1049 ntBASIC4.3□□□□□ -1.72
COL3A1P02461 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
COL3A1P02461 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL3A1P02461 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.3□□□□□ -1.72
COL3A1P02461 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL3A1P02461 DCAF13P1-201ENST00000495256 1330 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms