Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 VN1R78P-201ENST00000597393 564 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC013444.2-201ENST00000603317 787 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC004987.4-201ENST00000603383 338 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 DUXAP11-201ENST00000603858 526 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC093424.1-201ENST00000604999 338 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC069304.2-201ENST00000605154 435 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC243773.3-201ENST00000613270 256 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC109809.1-201ENST00000619665 545 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC244205.2-202ENST00000635781 342 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFBP01127 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFBP01127 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFBP01127 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
PDGFBP01127 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFBP01127 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PDGFBP01127 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFBP01127 SNORA7.4-201ENST00000384249 137 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 RNU6-83P-201ENST00000384568 112 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AL354719.1-201ENST00000406535 843 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFBP01127 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFBP01127 CCDC58P2-201ENST00000417131 366 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 AL590233.1-201ENST00000430017 456 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 TXNP1-201ENST00000441872 371 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.26□□□□□ -1.89
PDGFBP01127 MTCO3P20-201ENST00000454926 688 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFBP01127 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.26□□□□□ -1.89
PDGFBP01127 AC093281.2-201ENST00000510153 597 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 XKRY-201ENST00000510392 1100 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC112673.1-201ENST00000513168 575 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC022861.1-201ENST00000522981 663 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 OR5AK1P-201ENST00000524837 922 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC090695.1-201ENST00000561269 1222 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 MIR3921-201ENST00000577308 85 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 AC022022.2-201ENST00000602989 360 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC006270.3-201ENST00000605967 1036 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC097478.2-201ENST00000610572 514 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFBP01127 AL138880.2-201ENST00000616214 239 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AL356321.1-201ENST00000621360 228 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AP002782.1-201ENST00000623107 614 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC231657.1-201ENST00000624313 397 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 SNORA50A-202ENST00000629536 136 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PDGFBP01127 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.26□□□□□ -1.89
PDGFBP01127 AL021368.2-201ENST00000606125 5352 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AC005539.1-201ENST00000443768 1479 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 AP002907.1-201ENST00000606361 1430 ntBASIC3.26□□□□□ -1.89
PDGFBP01127 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFBP01127 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PDGFBP01127 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.25□□□□□ -1.89
PDGFBP01127 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 DEFB108F-201ENST00000344638 222 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 SNORA71.1-201ENST00000364523 117 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFBP01127 HMGB1P17-201ENST00000403495 628 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 HSPE1P8-201ENST00000406997 288 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 RNU2-43P-201ENST00000410306 190 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 RNU2-47P-201ENST00000410649 186 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFBP01127 NPM1P11-201ENST00000417106 855 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 ELOCP9-201ENST00000418624 239 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 MTCO2P5-201ENST00000422621 426 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 AC010099.3-201ENST00000423896 409 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 MTCO2P20-201ENST00000437339 673 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC010095.1-201ENST00000443543 144 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC104308.1-201ENST00000454621 333 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 SNORD11.1-201ENST00000459482 85 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 RN7SL93P-201ENST00000463035 293 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC126389.1-201ENST00000477436 290 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC023424.2-201ENST00000493479 777 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC010587.2-201ENST00000511727 448 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.25□□□□□ -1.89
PDGFBP01127 DEFB108D-201ENST00000527787 222 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 NBEAP1-201ENST00000554452 979 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms