Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZNF734P-201ENST00000419494 1534 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 RNA5SP97-201ENST00000365006 84 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 RNU6-744P-201ENST00000365557 107 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 RNU6-1316P-201ENST00000384242 108 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 RNU6-769P-201ENST00000384407 104 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 AL663109.1-201ENST00000411498 844 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MTCO3P41-201ENST00000414801 328 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 CDK8P2-201ENST00000415020 547 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MTATP6P27-201ENST00000416987 621 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 OFD1P18Y-201ENST00000420889 959 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC012065.2-201ENST00000421295 375 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC007742.1-201ENST00000425789 329 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 ELOCP26-201ENST00000436067 329 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC009969.1-201ENST00000438726 172 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC023424.2-201ENST00000493479 777 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC022447.3-201ENST00000506865 495 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MTND4LP31-201ENST00000514859 294 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MTND4LP18-201ENST00000526864 291 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AP002963.1-201ENST00000530590 184 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.35□□□□□ -1.87
CLPTM1O96005 MIR5697-201ENST00000578045 78 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC078795.2-201ENST00000602835 1252 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC112187.2-201ENST00000604345 283 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AC100793.4-201ENST00000613683 429 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 AL357080.1-201ENST00000617394 239 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLPTM1O96005 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLPTM1O96005 AC004925.1-201ENST00000624256 2706 ntBASIC3.35□□□□□ -1.87
CLPTM1O96005 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLPTM1O96005 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLPTM1O96005 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU4-91P-201ENST00000364778 135 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU5E-5P-201ENST00000365379 116 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU1-64P-201ENST00000365443 163 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU6-339P-201ENST00000384310 107 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU6-1119P-201ENST00000384349 108 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 Y_RNA.493-201ENST00000384422 102 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RNU6-878P-201ENST00000384578 110 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 MIR30B-201ENST00000384850 88 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 MTCO1P17-201ENST00000411522 491 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AL031779.1-201ENST00000415663 330 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
CLPTM1O96005 MTCO2P5-201ENST00000422621 426 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AL513174.1-201ENST00000423182 629 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC012498.1-201ENST00000424037 437 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AL356583.2-201ENST00000426536 280 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RPL21P66-201ENST00000426566 466 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 DPPA2P1-201ENST00000428060 556 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 USP9YP14-201ENST00000430663 563 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AL022238.1-201ENST00000442557 355 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPTM1O96005 ELOCP30-201ENST00000447108 299 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 SSXP1-201ENST00000453640 473 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms