Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN1O95832 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 TNPO1P3-201ENST00000436471 2662 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN1O95832 ZNF807-201ENST00000328088 1707 ntBASIC3.22□□□□□ -1.89
CLDN1O95832 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN1O95832 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CLDN1O95832 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 SNORA80A-201ENST00000363922 136 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 RNA5SP126-201ENST00000365092 109 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 SNORA75-201ENST00000384158 137 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 RNY3P10-201ENST00000384764 102 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 U8.14-201ENST00000390843 143 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 MIR320C1-201ENST00000408566 88 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 RNA5SP56-201ENST00000410277 118 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 CDK8P2-201ENST00000415020 547 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 MTATP6P27-201ENST00000416987 621 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC127526.1-201ENST00000417526 366 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 ZNF885P-201ENST00000420174 1098 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 MTCO2P34-201ENST00000421994 607 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AL513174.1-201ENST00000423182 629 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC005517.2-201ENST00000424673 553 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 PSMA6P3-201ENST00000428242 164 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 PSMA2P3-201ENST00000429685 675 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN1O95832 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN1O95832 AL138799.3-201ENST00000438968 350 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 GDI2P2-201ENST00000445131 608 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AL590399.6-201ENST00000446396 307 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.21□□□□□ -1.9
CLDN1O95832 HMGN2P7-201ENST00000456186 273 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 OR6K1P-201ENST00000456766 971 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 RN7SL93P-201ENST00000463035 293 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 RN7SL504P-201ENST00000494496 287 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC023141.12-201ENST00000512399 199 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 RANP9-201ENST00000519957 271 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN1O95832 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN1O95832 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN1O95832 AC006362.1-201ENST00000567392 174 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC006270.2-201ENST00000578523 652 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 BNIP3P23-201ENST00000599655 511 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AL365503.1-201ENST00000605247 905 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC128687.1-201ENST00000605304 619 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 AC103710.4-201ENST00000609301 899 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN1O95832 AC100793.4-201ENST00000613683 429 ntBASIC3.21□□□□□ -1.9
CLDN1O95832 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CLDN1O95832 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN1O95832 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN1O95832 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN1O95832 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN1O95832 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLDN1O95832 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN1O95832 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN1O95832 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLDN1O95832 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN1O95832 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLDN1O95832 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN1O95832 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLDN1O95832 RNU6-744P-201ENST00000365557 107 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 RNU6-1316P-201ENST00000384242 108 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 Y_RNA.505-201ENST00000384489 102 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 Y_RNA.559-201ENST00000384686 107 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN1O95832 AC109780.2-201ENST00000413467 845 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN1O95832 AC006548.1-201ENST00000427470 102 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN1O95832 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN1O95832 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN1O95832 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN1O95832 USP9YP29-201ENST00000445112 563 ntBASIC3.2□□□□□ -1.9
CLDN1O95832 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN1O95832 RPS17P13-201ENST00000448974 407 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms