Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL592114.1-201ENST00000403842 483 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AL035079.1-201ENST00000405210 287 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 MIR548F5-201ENST00000408421 86 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 SNORA77-201ENST00000408716 125 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC113618.1-201ENST00000416747 285 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 AL358176.2-201ENST00000425769 204 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 RPL7L1P10-201ENST00000427790 463 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.43□□□□□ -1.7
CNOT4O95628 MRPS18BP2-201ENST00000434310 759 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 PRPF38AP2-201ENST00000438179 851 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.43□□□□□ -1.7
CNOT4O95628 RPL21P89-201ENST00000444021 467 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 PRPS1P1-201ENST00000445305 876 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 RN7SL319P-201ENST00000480656 221 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 AC020893.1-201ENST00000502452 580 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC010350.1-201ENST00000504908 231 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC116562.3-201ENST00000506136 177 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC020593.1-201ENST00000507399 299 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC093303.1-201ENST00000514549 295 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 MYL12AP1-201ENST00000518490 515 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC022634.1-201ENST00000520765 532 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AP004371.1-201ENST00000525240 214 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC068587.5-201ENST00000528506 175 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC008033.2-201ENST00000542626 177 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 SNRPGP18-201ENST00000553000 214 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.43□□□□□ -1.7
CNOT4O95628 AC234771.5-201ENST00000600161 514 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.43□□□□□ -1.7
CNOT4O95628 CTHRC1P1-201ENST00000605383 469 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AL031666.3-201ENST00000609320 1006 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.43□□□□□ -1.7
CNOT4O95628 CR381572.2-201ENST00000624852 397 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNOT4O95628 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 AC027287.1-201ENST00000553115 1453 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 TAB3P1-202ENST00000452645 1634 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 Y_RNA.31-201ENST00000362574 102 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNU6-1309P-201ENST00000363305 108 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 Y_RNA.187-201ENST00000363918 113 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 RNU6-1029P-201ENST00000384109 107 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNU6-1181P-201ENST00000384191 106 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNU6-574P-201ENST00000384265 107 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CNOT4O95628 U3.29-201ENST00000391296 212 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 MIR548K-201ENST00000408406 116 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNU6-370P-201ENST00000411008 104 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 OR2AM1P-201ENST00000422137 422 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 PMCHL1-202ENST00000423102 261 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 C4BPAP2-201ENST00000428434 478 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 AC108059.2-201ENST00000434626 151 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 HMGB3P11-201ENST00000440127 604 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RPL34P20-201ENST00000442771 351 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 RNU7-180P-201ENST00000459240 63 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RN7SL459P-201ENST00000481078 302 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 RNU7-51P-201ENST00000516560 62 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 RNA5SP503-201ENST00000517047 117 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 Y_RNA.720-201ENST00000517166 92 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT4O95628 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CNOT4O95628 APOOP3-201ENST00000536787 586 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC063950.1-201ENST00000552036 308 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 AC007823.1-201ENST00000569932 1566 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 MIR4270-201ENST00000581799 70 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms