Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC0.76□□□□□ -2.29
USH2AO75445 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.76□□□□□ -2.29
USH2AO75445 AC025281.1-201ENST00000567026 265 ntBASIC0.76□□□□□ -2.29
USH2AO75445 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.76□□□□□ -2.29
USH2AO75445 MIR3660-201ENST00000584845 100 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AL353770.2-201ENST00000620024 78 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 UBE2L2-201ENST00000254302 429 ntBASIC0.76□□□□□ -2.29
USH2AO75445 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RNA5SP338-201ENST00000410495 85 ntBASIC0.76□□□□□ -2.29
USH2AO75445 USP9YP27-201ENST00000418455 438 ntBASIC0.76□□□□□ -2.29
USH2AO75445 THAP5P1-201ENST00000439089 262 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC234775.1-201ENST00000454247 670 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RPS29P29-201ENST00000456396 171 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.76□□□□□ -2.29
USH2AO75445 MIR2909-201ENST00000617113 69 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AL138955.1-201ENST00000622881 1040 ntBASIC0.76□□□□□ -2.29
USH2AO75445 MIR338-201ENST00000636369 67 ntBASIC0.76□□□□□ -2.29
USH2AO75445 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC0.75□□□□□ -2.29
USH2AO75445 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 PDCL2P2-201ENST00000533651 189 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC005498.1-201ENST00000592125 465 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC116447.1-201ENST00000613153 453 ntBASIC0.75□□□□□ -2.29
USH2AO75445 SNRPEP3-201ENST00000338402 276 ntBASIC0.75□□□□□ -2.29
USH2AO75445 HSPD1P16-201ENST00000402302 394 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC0.75□□□□□ -2.29
USH2AO75445 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 USP9YP10-201ENST00000454868 628 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AF186190.1-201ENST00000517470 480 ntBASIC0.75□□□□□ -2.29
USH2AO75445 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 MTND4P23-201ENST00000447723 1363 ntBASIC0.75□□□□□ -2.29
USH2AO75445 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 AC116158.1-201ENST00000560231 2129 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 AC012498.1-201ENST00000424037 437 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AL358176.2-201ENST00000425769 204 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC0.75□□□□□ -2.29
USH2AO75445 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 snoU13.3-201ENST00000459441 104 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 NF1P5-201ENST00000588287 448 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC083806.3-201ENST00000614016 455 ntBASIC0.75□□□□□ -2.29
USH2AO75445 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
USH2AO75445 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
USH2AO75445 SNORA48.3-201ENST00000391081 134 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC093084.1-201ENST00000424233 687 ntBASIC0.75□□□□□ -2.29
USH2AO75445 RPS3AP44-201ENST00000425466 790 ntBASIC0.75□□□□□ -2.29
USH2AO75445 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC0.75□□□□□ -2.29
USH2AO75445 FGF7P3-201ENST00000454645 303 ntBASIC0.75□□□□□ -2.29
USH2AO75445 RNU6-1132P-201ENST00000459214 107 ntBASIC0.75□□□□□ -2.29
USH2AO75445 RPS23P4-201ENST00000487908 423 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC109464.2-201ENST00000510242 943 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
USH2AO75445 AC013244.3-201ENST00000605614 388 ntBASIC0.75□□□□□ -2.29
USH2AO75445 AC068944.2-201ENST00000610373 403 ntBASIC0.75□□□□□ -2.29
USH2AO75445 BX649567.1-201ENST00000642071 1134 ntBASIC0.75□□□□□ -2.29
USH2AO75445 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
USH2AO75445 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
USH2AO75445 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC0.75□□□□□ -2.29
USH2AO75445 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
USH2AO75445 Y_RNA.132-201ENST00000363421 102 ntBASIC0.74□□□□□ -2.29
USH2AO75445 RNY3-201ENST00000365484 102 ntBASIC0.74□□□□□ -2.29
USH2AO75445 SAR1AP2-201ENST00000392696 594 ntBASIC0.74□□□□□ -2.29
USH2AO75445 SNORD88.1-201ENST00000408684 91 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.74□□□□□ -2.29
USH2AO75445 COX6CP12-201ENST00000446748 202 ntBASIC0.74□□□□□ -2.29
USH2AO75445 HMGN2P18-201ENST00000450680 270 ntBASIC0.74□□□□□ -2.29
USH2AO75445 IFNWP4-201ENST00000453148 294 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC019176.1-201ENST00000518519 225 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC024614.2-201ENST00000577584 372 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 MIR6078-201ENST00000611069 100 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC013562.2-201ENST00000611632 603 ntBASIC0.74□□□□□ -2.29
USH2AO75445 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 RNU6-328P-201ENST00000390887 106 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AL596276.1-201ENST00000434465 418 ntBASIC0.74□□□□□ -2.29
USH2AO75445 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.74□□□□□ -2.29
USH2AO75445 AC107032.1-201ENST00000485945 480 ntBASIC0.74□□□□□ -2.29
USH2AO75445 USP9YP5-201ENST00000511770 630 ntBASIC0.74□□□□□ -2.29
USH2AO75445 PDCD5P1-201ENST00000543528 309 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 AC005336.3-201ENST00000623833 2679 ntBASIC0.74□□□□□ -2.29
USH2AO75445 ZNF720P1-201ENST00000562403 1939 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms