Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RNF40O75150 RNU1-150P-201ENST00000362491 162 ntBASIC6.24□□□□□ -1.41
RNF40O75150 Y_RNA.273-201ENST00000364703 102 ntBASIC6.24□□□□□ -1.41
RNF40O75150 RNU6-1130P-201ENST00000365434 107 ntBASIC6.24□□□□□ -1.41
RNF40O75150 RNU6-817P-201ENST00000391083 104 ntBASIC6.24□□□□□ -1.41
RNF40O75150 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF40O75150 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF40O75150 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 RN7SL352P-201ENST00000466002 277 ntBASIC6.24□□□□□ -1.41
RNF40O75150 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF40O75150 AC022133.1-201ENST00000490961 571 ntBASIC6.24□□□□□ -1.41
RNF40O75150 SNORA31.3-201ENST00000516029 96 ntBASIC6.24□□□□□ -1.41
RNF40O75150 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF40O75150 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 AC126615.2-201ENST00000553003 515 ntBASIC6.24□□□□□ -1.41
RNF40O75150 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF40O75150 RNU4ATAC-201ENST00000580972 127 ntBASIC6.24□□□□□ -1.41
RNF40O75150 MIR4443-201ENST00000585052 53 ntBASIC6.24□□□□□ -1.41
RNF40O75150 AC240442.1-201ENST00000616055 283 ntBASIC6.24□□□□□ -1.41
RNF40O75150 MIR6864-201ENST00000617935 70 ntBASIC6.24□□□□□ -1.41
RNF40O75150 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF40O75150 MTND1P7-201ENST00000632801 297 ntBASIC6.24□□□□□ -1.41
RNF40O75150 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RNF40O75150 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF40O75150 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF40O75150 RBBP8P1-201ENST00000449447 1844 ntBASIC6.24□□□□□ -1.41
RNF40O75150 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF40O75150 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF40O75150 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RNF40O75150 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF40O75150 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
RNF40O75150 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 AC008758.3-201ENST00000507003 1829 ntBASIC6.23□□□□□ -1.41
RNF40O75150 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 AC133552.1-201ENST00000569988 4007 ntBASIC6.23□□□□□ -1.41
RNF40O75150 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 RN7SKP185-201ENST00000362813 326 ntBASIC6.23□□□□□ -1.41
RNF40O75150 SNORA43.1-201ENST00000364863 140 ntBASIC6.23□□□□□ -1.41
RNF40O75150 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 CR769767.1-201ENST00000436337 346 ntBASIC6.23□□□□□ -1.41
RNF40O75150 AL663074.2-201ENST00000440621 479 ntBASIC6.23□□□□□ -1.41
RNF40O75150 RPL26P6-201ENST00000440913 438 ntBASIC6.23□□□□□ -1.41
RNF40O75150 AC064862.4-201ENST00000442180 334 ntBASIC6.23□□□□□ -1.41
RNF40O75150 AL445665.1-202ENST00000452436 324 ntBASIC6.23□□□□□ -1.41
RNF40O75150 RPL12P39-201ENST00000455456 496 ntBASIC6.23□□□□□ -1.41
RNF40O75150 VN1R105P-201ENST00000486595 910 ntBASIC6.23□□□□□ -1.41
RNF40O75150 RPL30P11-201ENST00000495304 339 ntBASIC6.23□□□□□ -1.41
RNF40O75150 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.23□□□□□ -1.41
RNF40O75150 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF40O75150 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.23□□□□□ -1.41
RNF40O75150 RNA5SP440-201ENST00000612665 119 ntBASIC6.23□□□□□ -1.41
RNF40O75150 AL137067.2-201ENST00000621202 131 ntBASIC6.23□□□□□ -1.41
RNF40O75150 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 AL137141.1-201ENST00000624622 4836 ntBASIC6.23□□□□□ -1.41
RNF40O75150 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF40O75150 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RNF40O75150 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RNF40O75150 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF40O75150 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF40O75150 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.82-201ENST00000363000 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.92-201ENST00000363043 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 RN7SKP145-201ENST00000363291 303 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.235-201ENST00000364412 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.306-201ENST00000365015 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.312-201ENST00000365089 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.322-201ENST00000365151 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 RNU6-326P-201ENST00000365480 107 ntBASIC6.22□□□□□ -1.41
RNF40O75150 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 MIR190B-201ENST00000401119 79 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AL033519.2-201ENST00000403958 392 ntBASIC6.22□□□□□ -1.41
RNF40O75150 RPL31P2-201ENST00000413849 377 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AC079809.1-201ENST00000415468 276 ntBASIC6.22□□□□□ -1.41
RNF40O75150 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms