Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PTCD1O75127 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCD1O75127 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PTCD1O75127 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC097063.1-201ENST00000426714 1797 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCD1O75127 SALL4P2-201ENST00000423288 2910 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCD1O75127 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 IQCB2P-201ENST00000401788 1633 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCD1O75127 Y_RNA.28-201ENST00000362554 111 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 SNORD113-7-201ENST00000363762 77 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 RNU6-702P-201ENST00000364982 107 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCD1O75127 Y_RNA.476-201ENST00000384347 108 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 Y_RNA.576-201ENST00000384781 102 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 MT-TC-201ENST00000387405 66 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 RPL37P10-201ENST00000412884 288 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC005094.1-201ENST00000440420 368 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC020550.1-201ENST00000447385 163 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC005008.1-201ENST00000456151 612 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCD1O75127 SNORD97-201ENST00000459187 142 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 RN7SL809P-201ENST00000482040 297 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 TRBVA-201ENST00000498804 316 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 RN7SKP24-201ENST00000515888 284 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCD1O75127 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 MIR4790-201ENST00000577799 79 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC024619.4-201ENST00000580924 316 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC073539.2-201ENST00000597113 165 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 VN1R85P-201ENST00000601587 426 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC092747.3-201ENST00000603769 301 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC012443.1-201ENST00000605605 231 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 AC012603.1-201ENST00000606424 528 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCD1O75127 AC023043.4-201ENST00000612081 449 ntBASIC5.9□□□□□ -1.46
PTCD1O75127 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
PTCD1O75127 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PTCD1O75127 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
PTCD1O75127 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.9□□□□□ -1.47
PTCD1O75127 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
PTCD1O75127 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTCD1O75127 SAGE4P-201ENST00000442271 3381 ntBASIC5.9□□□□□ -1.47
PTCD1O75127 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
PTCD1O75127 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTCD1O75127 API5P2-201ENST00000397055 1498 ntBASIC5.9□□□□□ -1.47
PTCD1O75127 AC133552.1-201ENST00000569988 4007 ntBASIC5.9□□□□□ -1.47
PTCD1O75127 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCD1O75127 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 AL391684.1-202ENST00000641293 1636 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCD1O75127 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCD1O75127 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCD1O75127 Y_RNA.47-201ENST00000362697 108 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 Y_RNA.148-201ENST00000363557 117 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 Y_RNA.197-201ENST00000364004 102 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 RNU6-61P-201ENST00000365528 109 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 RNU6-339P-201ENST00000384310 107 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 RNU6-146P-201ENST00000384602 108 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC005517.2-201ENST00000424673 553 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC011998.1-201ENST00000433403 117 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 RPL36AP6-201ENST00000435770 321 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCD1O75127 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 RNU7-152P-201ENST00000458982 64 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 U8.20-201ENST00000459445 131 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC128716.1-201ENST00000475129 166 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC105137.1-201ENST00000484355 562 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCD1O75127 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCD1O75127 RNU6-566P-201ENST00000516790 107 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 RNU6-1092P-201ENST00000516955 87 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 MRPL49P2-201ENST00000521066 465 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 HMGN1P28-201ENST00000521340 364 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 DEFB108D-201ENST00000527787 222 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 APOOP3-201ENST00000536787 586 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 SETP7-201ENST00000552169 453 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 SNRPGP18-201ENST00000553000 214 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC025884.1-201ENST00000556034 378 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 MIR4680-201ENST00000580906 66 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 MIR4293-201ENST00000584305 78 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 IPO5P1-202ENST00000600039 287 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 AC020634.1-201ENST00000608701 549 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 Z82243.1-201ENST00000609432 473 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCD1O75127 AC055839.1-201ENST00000634467 498 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms