Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
SHOX2O60902 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
SHOX2O60902 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
SHOX2O60902 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.53□□□□□ -2.01
SHOX2O60902 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
SHOX2O60902 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
SHOX2O60902 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2.01
SHOX2O60902 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
SHOX2O60902 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHOX2O60902 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHOX2O60902 OR5T3-201ENST00000303059 1023 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHOX2O60902 RNU6-115P-201ENST00000364310 107 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 Y_RNA.226-201ENST00000364337 114 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 RNU6-619P-201ENST00000365146 108 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 U3.29-201ENST00000391296 212 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AL024474.1-201ENST00000404655 591 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.52□□□□□ -2.01
SHOX2O60902 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.52□□□□□ -2.01
SHOX2O60902 MTCO1P39-201ENST00000426148 480 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 MTND4LP10-201ENST00000435146 291 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.52□□□□□ -2.01
SHOX2O60902 UBBP3-201ENST00000445497 241 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 SETP11-201ENST00000473027 690 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC023424.2-201ENST00000493479 777 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC093767.1-201ENST00000504523 156 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC009901.1-201ENST00000506703 541 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.52□□□□□ -2.01
SHOX2O60902 AC010374.2-201ENST00000512933 535 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 RNA5SP445-201ENST00000515889 115 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 OR4P1P-201ENST00000530808 1136 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AP002404.1-201ENST00000532005 451 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.52□□□□□ -2.01
SHOX2O60902 H3F3AP1-201ENST00000559984 334 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 CYCSP39-201ENST00000565821 309 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AL390838.2-201ENST00000602394 274 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC012669.1-201ENST00000603209 283 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AL353748.2-201ENST00000622148 471 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 MFSD8-245ENST00000641743 948 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 AC138915.1-201ENST00000565427 1685 ntBASIC2.52□□□□□ -2.01
SHOX2O60902 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHOX2O60902 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
SHOX2O60902 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.52□□□□□ -2.01
SHOX2O60902 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SHOX2O60902 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHOX2O60902 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHOX2O60902 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHOX2O60902 RNA5SP252-201ENST00000391131 119 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 FO393413.1-201ENST00000402892 195 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AL138885.1-201ENST00000405921 675 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AL645937.1-202ENST00000421799 937 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 RPL35AP12-201ENST00000425362 338 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AL691517.1-201ENST00000440833 1235 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
SHOX2O60902 RPL7P36-201ENST00000444633 681 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 OR6K5P-201ENST00000447050 945 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 NAP1L1P3-201ENST00000462291 880 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.51□□□□□ -2.01
SHOX2O60902 GTF2IP9-201ENST00000502460 301 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.51□□□□□ -2.01
SHOX2O60902 RNU6-1095P-201ENST00000516148 108 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC087373.1-201ENST00000524920 491 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 OR4R2P-201ENST00000530815 597 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHOX2O60902 AC103810.1-201ENST00000579873 453 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 SNORD39.3-201ENST00000584451 71 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC020895.1-201ENST00000595362 272 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.51□□□□□ -2.01
SHOX2O60902 GAS5-AS1-201ENST00000602767 694 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AL020997.3-201ENST00000602843 359 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 OR4H6P-202ENST00000603819 340 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.51□□□□□ -2.01
SHOX2O60902 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 AP006248.3-201ENST00000623580 594 ntBASIC2.51□□□□□ -2.01
SHOX2O60902 HSPA8P4-201ENST00000511877 1920 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHOX2O60902 DBF4P1-201ENST00000412976 1892 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHOX2O60902 SNORA51.11-201ENST00000384442 131 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 SNORA44-201ENST00000384584 132 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 MIR493-201ENST00000385254 89 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RSL24D1P4-201ENST00000400938 484 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 AL136372.1-201ENST00000403060 228 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RNA5SP21-201ENST00000410917 96 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RNA5SP508-201ENST00000411327 119 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 HMGB3P2-201ENST00000411913 584 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RPL27AP8-201ENST00000424277 446 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 EZH2P1-201ENST00000431167 291 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms