Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNU6-216P-201ENST00000363282 104 ntBASIC3.2□□□□□ -1.9
E2F3O00716 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
E2F3O00716 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F3O00716 RNU6-1122P-201ENST00000384449 107 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNU6-882P-201ENST00000391025 103 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AF228730.1-201ENST00000397972 663 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
E2F3O00716 TIMM9P2-201ENST00000419324 266 ntBASIC3.2□□□□□ -1.9
E2F3O00716 MTATP6P17-201ENST00000431030 672 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
E2F3O00716 MTCO2P20-201ENST00000437339 673 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
E2F3O00716 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
E2F3O00716 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 AL590664.1-201ENST00000448065 339 ntBASIC3.2□□□□□ -1.9
E2F3O00716 ANKRD26P4-201ENST00000455755 950 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC093663.1-201ENST00000497190 394 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 POU5F1P7-201ENST00000508759 541 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC010587.2-201ENST00000511727 448 ntBASIC3.2□□□□□ -1.9
E2F3O00716 APOOP4-201ENST00000513530 597 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
E2F3O00716 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
E2F3O00716 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.2□□□□□ -1.9
E2F3O00716 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F3O00716 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F3O00716 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.2□□□□□ -1.9
E2F3O00716 AC125611.1-201ENST00000549563 229 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 AC087465.1-201ENST00000560574 245 ntBASIC3.2□□□□□ -1.9
E2F3O00716 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.2□□□□□ -1.9
E2F3O00716 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F3O00716 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F3O00716 NIFKP6-201ENST00000598115 845 ntBASIC3.2□□□□□ -1.9
E2F3O00716 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
E2F3O00716 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
E2F3O00716 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AP002791.1-201ENST00000623291 381 ntBASIC3.2□□□□□ -1.9
E2F3O00716 MIR1322-201ENST00000638013 71 ntBASIC3.2□□□□□ -1.9
E2F3O00716 AC011460.1-201ENST00000636268 1834 ntBASIC3.2□□□□□ -1.9
E2F3O00716 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
E2F3O00716 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
E2F3O00716 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
E2F3O00716 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
E2F3O00716 AP002907.1-201ENST00000606361 1430 ntBASIC3.19□□□□□ -1.9
E2F3O00716 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
E2F3O00716 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F3O00716 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F3O00716 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
E2F3O00716 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
E2F3O00716 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
E2F3O00716 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
E2F3O00716 U3.19-201ENST00000390893 196 ntBASIC3.19□□□□□ -1.9
E2F3O00716 RNU6-757P-201ENST00000410334 100 ntBASIC3.19□□□□□ -1.9
E2F3O00716 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
E2F3O00716 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F3O00716 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
E2F3O00716 RPL23AP74-201ENST00000437246 471 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC092427.1-201ENST00000439177 601 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F3O00716 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F3O00716 MTND1P31-201ENST00000449206 961 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 AL359385.1-201ENST00000456509 365 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 COX7A2P2-201ENST00000505291 250 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC021146.8-201ENST00000507455 733 ntBASIC3.19□□□□□ -1.9
E2F3O00716 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.19□□□□□ -1.9
E2F3O00716 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
E2F3O00716 SNORA70.16-201ENST00000516390 95 ntBASIC3.19□□□□□ -1.9
E2F3O00716 SLC2A13P1-201ENST00000531560 322 ntBASIC3.19□□□□□ -1.9
E2F3O00716 ZNF321P-202ENST00000550843 495 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F3O00716 AC009712.1-201ENST00000564938 316 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL512347.1-201ENST00000566420 503 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.19□□□□□ -1.9
E2F3O00716 VN1R82P-201ENST00000601481 356 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL031281.1-201ENST00000604049 488 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL031176.1-201ENST00000604554 466 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AL137843.1-201ENST00000605078 385 ntBASIC3.19□□□□□ -1.9
E2F3O00716 Z99289.3-201ENST00000605586 594 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC006270.3-201ENST00000605967 1036 ntBASIC3.19□□□□□ -1.9
E2F3O00716 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.19□□□□□ -1.9
E2F3O00716 AC091304.6-201ENST00000619761 202 ntBASIC3.19□□□□□ -1.9
E2F3O00716 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F3O00716 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
E2F3O00716 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
E2F3O00716 TAB3P1-202ENST00000452645 1634 ntBASIC3.19□□□□□ -1.9
E2F3O00716 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
E2F3O00716 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms