Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 AL592156.1-201ENST00000508758 304 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM38O00635 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM38O00635 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM38O00635 AC034268.2-201ENST00000571784 482 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM38O00635 AP000860.1-201ENST00000605250 559 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 MIR6130-201ENST00000619419 109 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 LRRC77P-213ENST00000637727 880 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM38O00635 AC010733.2-201ENST00000589496 5702 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM38O00635 MTND5P33-201ENST00000571250 1450 ntBASIC4.18□□□□□ -1.74
TRIM38O00635 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 ZNF962P-201ENST00000443465 3140 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM38O00635 AP001350.1-201ENST00000601906 1524 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 RLIMP1-201ENST00000339626 1680 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 SNORA31-201ENST00000362607 130 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 RNA5SP235-201ENST00000365411 114 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 Y_RNA.450-201ENST00000384198 113 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 RNU6-809P-201ENST00000384461 107 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 SNORD3H-201ENST00000384486 214 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 MT-TL1-201ENST00000386347 75 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 Y_RNA.582-201ENST00000391023 95 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 RNA5SP171-201ENST00000391071 115 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM38O00635 DPPA3P1-201ENST00000448050 469 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 RPS17P13-201ENST00000448974 407 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM38O00635 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM38O00635 MTCO1P42-201ENST00000457379 726 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC034236.1-201ENST00000469891 373 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 AC006517.1-201ENST00000480485 328 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AL358832.1-201ENST00000497800 389 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC117522.3-201ENST00000507974 584 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 MTND3P22-201ENST00000510932 243 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM38O00635 RN7SKP298-201ENST00000515950 94 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM38O00635 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM38O00635 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM38O00635 MIR5697-201ENST00000578045 78 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 MIR4286-201ENST00000580651 93 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 MIR3158-1-201ENST00000583596 81 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 UBE2L4-201ENST00000587688 464 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC005498.1-201ENST00000592125 465 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AL359999.1-201ENST00000604513 294 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AL121655.1-201ENST00000605811 308 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC098614.4-201ENST00000607601 462 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC091304.9-201ENST00000612091 226 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC006133.1-201ENST00000617106 264 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC009159.1-201ENST00000618386 642 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC009268.2-201ENST00000621925 457 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AL353748.2-201ENST00000622148 471 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 C2orf27A-204ENST00000623058 969 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AL158801.5-201ENST00000623123 465 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 AC112200.1-201ENST00000625015 234 ntBASIC4.17□□□□□ -1.74
TRIM38O00635 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM38O00635 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM38O00635 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.17□□□□□ -1.74
TRIM38O00635 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM38O00635 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 MTCO1P9-201ENST00000505577 1534 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM38O00635 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 RNU6-533P-201ENST00000384144 107 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 RNU6-1009P-201ENST00000390996 107 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 SNORD66.1-201ENST00000391230 76 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 RNU6-876P-201ENST00000391295 104 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 RPL21P65-201ENST00000406094 466 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 RPL7P2-201ENST00000427639 268 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 RPS6P12-201ENST00000432491 726 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC007677.1-201ENST00000445757 515 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms