Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM1O00151 CYCSP2-201ENST00000558168 301 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AC090615.1-201ENST00000577519 154 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 FAM60BP-201ENST00000578364 658 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM1O00151 BBIP1P1-201ENST00000602999 279 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AL390208.1-201ENST00000605885 644 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC092106.3-201ENST00000611308 722 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AL355810.1-201ENST00000614629 552 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AC002076.2-201ENST00000617362 122 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC023510.2-201ENST00000622162 746 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDLIM1O00151 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM1O00151 SGO1P2-201ENST00000429458 1589 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDLIM1O00151 FAM133CP-201ENST00000332869 704 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 RNU6-83P-201ENST00000384568 112 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 RPL21P32-201ENST00000419877 477 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AL953862.1-201ENST00000423016 168 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.03□□□□□ -1.92
PDLIM1O00151 Z73417.1-201ENST00000447373 778 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC009961.3-201ENST00000449832 765 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 BX322784.1-201ENST00000455793 1077 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 RPL23AP31-201ENST00000456160 467 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 MEMO1P3-201ENST00000459811 302 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 RPL21P13-201ENST00000488305 481 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 IGKV2-26-201ENST00000518305 343 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 AP001372.4-201ENST00000524889 472 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC022690.1-201ENST00000526681 550 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC004486.1-201ENST00000546846 233 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM1O00151 MTND1P24-201ENST00000552175 861 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC138761.3-201ENST00000579993 334 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 COX6CP3-201ENST00000580869 223 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.03□□□□□ -1.92
PDLIM1O00151 MIR4760-201ENST00000585040 80 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM1O00151 DUXAP11-201ENST00000603858 526 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC004853.1-201ENST00000604902 698 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM1O00151 AL355365.1-201ENST00000616480 294 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AL356321.1-201ENST00000621360 228 ntBASIC3.03□□□□□ -1.92
PDLIM1O00151 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM1O00151 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM1O00151 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PDLIM1O00151 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
PDLIM1O00151 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM1O00151 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM1O00151 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PDLIM1O00151 SNORA63.1-201ENST00000362493 131 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 RNA5SP50-201ENST00000363731 107 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 RNA5SP229-201ENST00000410809 99 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AL008987.1-201ENST00000415528 237 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AL096701.2-201ENST00000416920 238 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 MTCYBP38-201ENST00000417160 1123 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM1O00151 BX842559.1-201ENST00000419615 532 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AC097713.2-201ENST00000430199 356 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 EZH2P1-201ENST00000431167 291 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM1O00151 RPL36AP6-201ENST00000435770 321 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AC104090.1-201ENST00000506341 1171 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 SNORA31.8-201ENST00000516327 108 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM1O00151 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM1O00151 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms