Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC188H7C350 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 ZNF807-201ENST00000328088 1707 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AL161912.2-201ENST00000565707 3007 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
CCDC188H7C350 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC188H7C350 SNORD113-6-201ENST00000363345 75 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 Y_RNA.302-201ENST00000364997 102 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 Y_RNA.548-201ENST00000384656 105 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC245054.2-201ENST00000415639 319 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 OR6C5P-201ENST00000452388 923 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC188H7C350 SNORA70.16-201ENST00000516390 95 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 SNORA67.7-201ENST00000516664 135 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 MTATP6P15-201ENST00000527233 835 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC188H7C350 MIR3921-201ENST00000577308 85 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC060771.1-201ENST00000582031 164 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC105224.1-201ENST00000587055 421 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AP000811.1-201ENST00000603803 651 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC099063.3-201ENST00000642066 185 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC188H7C350 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 CUL1P1-201ENST00000509510 2425 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 MTND4P16-201ENST00000466108 1367 ntBASIC3.38□□□□□ -1.87
CCDC188H7C350 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC188H7C350 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
CCDC188H7C350 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC188H7C350 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC188H7C350 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC188H7C350 RNU6-76P-201ENST00000384060 104 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 RNU6-432P-201ENST00000384196 109 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 RN7SKP266-201ENST00000410232 287 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 UBE2D3P2-201ENST00000424409 445 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 AL590383.1-201ENST00000428602 75 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 NOTCH2P1-201ENST00000443481 624 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 MTND1P9-201ENST00000453775 944 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 RPL31P60-201ENST00000478450 367 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC118282.1-201ENST00000506408 765 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 RNU6-678P-201ENST00000516832 109 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC188H7C350 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 SETP2-201ENST00000553886 926 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AL163153.1-201ENST00000554223 283 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 AC011260.1-201ENST00000578420 472 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC188H7C350 MIR3158-1-201ENST00000583596 81 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC188H7C350 MIR4999-201ENST00000585029 91 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC024560.3-201ENST00000608482 349 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 AC140725.3-201ENST00000616193 880 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC006133.1-201ENST00000617106 264 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 AL031667.3-201ENST00000620124 655 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 MIR6075-201ENST00000620782 95 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC131159.1-201ENST00000621854 213 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC244258.1-201ENST00000637553 1071 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC188H7C350 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC188H7C350 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 MTND5P19-201ENST00000424872 1794 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 AC012321.1-201ENST00000561622 1588 ntBASIC3.37□□□□□ -1.87
CCDC188H7C350 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC188H7C350 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC188H7C350 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
CCDC188H7C350 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC188H7C350 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC188H7C350 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC188H7C350 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC188H7C350 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC188H7C350 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
CCDC188H7C350 RPS4XP3-201ENST00000398541 413 ntBASIC3.36□□□□□ -1.87
CCDC188H7C350 U3.42-201ENST00000408746 214 ntBASIC3.36□□□□□ -1.87
CCDC188H7C350 CYCSP19-201ENST00000411715 316 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms