Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR3200-201ENST00000580767 85 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010615.3-201ENST00000597319 394 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007619.2-201ENST00000605743 379 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AP000254.1-201ENST00000609934 520 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC090116.1-201ENST00000615679 446 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC244517.12-201ENST00000623581 663 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AP003400.5-201ENST00000624827 617 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008432.1-201ENST00000615912 1320 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 WWP1P1-201ENST00000466609 2769 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008568.2-201ENST00000623862 2313 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC016716.1-201ENST00000265882 708 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL32P3-201ENST00000359025 275 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 SNORA38.1-201ENST00000364172 131 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL7P27-201ENST00000403775 720 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 NDUFB4P4-201ENST00000404822 243 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RN7SKP140-201ENST00000411196 284 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL133384.1-201ENST00000412744 351 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 NANOGP5-201ENST00000424456 877 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL353729.1-201ENST00000425044 720 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC005002.1-201ENST00000447458 540 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL21P134-201ENST00000453468 483 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-420P-201ENST00000458780 107 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC107032.1-201ENST00000485945 480 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 RPS29P20-201ENST00000489592 171 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC112518.2-201ENST00000508565 425 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC093770.1-201ENST00000511559 571 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 OR5AL2P-201ENST00000532185 920 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR4285-201ENST00000581001 85 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC012669.1-201ENST00000603209 283 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC006023.1-201ENST00000603944 259 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008745.1-201ENST00000604064 271 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC003001.2-201ENST00000616294 831 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC009831.4-201ENST00000620744 325 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010872.1-201ENST00000624225 675 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR7641-1-201ENST00000627518 61 ntBASIC1.09□□□□□ -2.23
CHKB-CPT1BH3BT56 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CHKB-CPT1BH3BT56 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHKB-CPT1BH3BT56 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 Z99496.1-201ENST00000469424 1477 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-1159P-201ENST00000362933 107 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-173P-201ENST00000364215 104 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 SNORA18.3-201ENST00000384122 132 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-1035P-201ENST00000384477 107 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-19P-201ENST00000384718 107 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL356432.1-201ENST00000405809 419 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU2-17P-201ENST00000410290 190 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 OR9R1P-201ENST00000412200 877 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC107081.1-201ENST00000414975 361 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC003685.2-201ENST00000422795 395 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL009174.1-201ENST00000426577 416 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 ARL4AP4-201ENST00000434170 518 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL591503.2-201ENST00000442314 1005 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL360221.1-201ENST00000445989 335 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AP001486.1-201ENST00000463339 476 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC025181.1-201ENST00000477507 416 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC104685.1-201ENST00000502445 371 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU5F-8P-201ENST00000515941 111 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC118273.2-201ENST00000532092 465 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC010186.2-204ENST00000537668 439 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms