Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMKR1H3BMG3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC126755.2-208ENST00000327792 462 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC138969.1-213ENST00000331436 462 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RPL32P3-201ENST00000359025 275 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RNU6-744P-201ENST00000365557 107 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RNU1-39P-201ENST00000383897 165 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AL590084.2-201ENST00000401481 382 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RN7SKP140-201ENST00000411196 284 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RAB28P1-201ENST00000411517 641 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC007919.1-201ENST00000429380 217 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC073063.1-201ENST00000434352 607 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RPL27AP5-201ENST00000469428 449 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RPS20P22-201ENST00000473700 357 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 KC877373.1-201ENST00000479066 408 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 HMGB1P36-201ENST00000487709 576 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RN7SL20P-201ENST00000488827 297 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 WBP1LP4-201ENST00000505043 344 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC022447.3-201ENST00000506865 495 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC113155.1-201ENST00000511141 769 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 RN7SKP122-201ENST00000515923 296 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 CCNG2P1-201ENST00000549521 1000 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AL391261.3-201ENST00000557194 520 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC034105.3-201ENST00000565294 442 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC103810.1-201ENST00000579873 453 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC006130.2-201ENST00000586202 326 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AL139344.1-201ENST00000605228 195 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC090186.1-201ENST00000605991 572 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AL161734.1-201ENST00000609720 557 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC245297.2-201ENST00000610119 565 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC079395.3-201ENST00000615161 484 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 ZYXP1-201ENST00000617638 118 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC103798.2-201ENST00000624292 632 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 MIR7641-1-201ENST00000627518 61 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 AC116618.1-201ENST00000634617 774 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 MTND1P37-201ENST00000636562 264 ntBASIC2.26□□□□□ -2.05
SMKR1H3BMG3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMKR1H3BMG3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RNU6-223P-201ENST00000362830 107 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RNU6-289P-201ENST00000364093 107 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AL359837.1-201ENST00000381357 287 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MIR585-201ENST00000384887 94 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AL356057.2-201ENST00000403318 432 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 TXNP7-201ENST00000406296 293 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AL355143.1-201ENST00000407101 841 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RNU2-33P-201ENST00000410344 192 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RNU2-25P-201ENST00000411041 191 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RNA5SP344-201ENST00000411081 104 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPL19P1-201ENST00000411635 428 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 BX682237.1-201ENST00000415016 335 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPS3AP37-201ENST00000419176 745 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 ZNF863P-201ENST00000426746 417 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 CYCSP4-201ENST00000429682 331 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 GTF2IP20-201ENST00000431663 360 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPL35AP22-201ENST00000436855 335 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 COX7BP2-201ENST00000437976 242 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPL21P2-201ENST00000440049 481 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AL162389.1-201ENST00000449233 177 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 USP9YP10-201ENST00000454868 628 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RN7SL132P-201ENST00000478131 296 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC126182.1-201ENST00000478134 357 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPL23AP70-201ENST00000483361 460 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RN7SL633P-201ENST00000488974 297 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms