Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 MIR1289-2-201ENST00000408360 111 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AC004022.2-201ENST00000413824 193 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 RPL21P66-201ENST00000426566 466 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AL513124.1-201ENST00000450410 614 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 ATG12P2-201ENST00000456830 416 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 NUP58P1-201ENST00000502546 1738 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AC008749.1-201ENST00000597650 306 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AC008083.4-201ENST00000615076 444 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 AP006437.1-201ENST00000641440 3685 ntBASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CPSF4LA6NMK7 RNA5SP190-201ENST00000365222 118 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 SNORA26.9-201ENST00000391322 122 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AL138880.1-201ENST00000405824 642 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC244098.2-201ENST00000422068 99 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC007677.1-201ENST00000445757 515 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 CDC42P1-201ENST00000456658 548 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC008481.1-201ENST00000463278 396 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MTCO3P35-201ENST00000485582 781 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC008427.1-201ENST00000503102 655 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MTCYBP17-201ENST00000503579 789 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MTND3P24-201ENST00000506306 329 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 EEF1A1P37-201ENST00000522748 715 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MIR3683-201ENST00000580847 82 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC034236.3-201ENST00000605999 461 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 MIR203B-201ENST00000636080 86 ntBASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CPSF4LA6NMK7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 MIR627-201ENST00000384979 97 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AL360221.1-201ENST00000445989 335 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AL035407.2-201ENST00000454090 378 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 HMGB1P38-201ENST00000490557 577 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AP000916.1-201ENST00000533869 835 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AP000873.5-201ENST00000533906 236 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC015720.1-201ENST00000565251 277 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 DEFB122-202ENST00000569013 197 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC090616.5-202ENST00000582111 297 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AL035411.2-201ENST00000604022 421 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC008962.1-201ENST00000605729 304 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 AC091953.2-201ENST00000623979 160 ntBASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF4LA6NMK7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
CPSF4LA6NMK7 RNF6P1-201ENST00000444889 1784 ntBASIC1.34□□□□□ -2.2
CPSF4LA6NMK7 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AL355497.1-201ENST00000406262 551 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AL034374.1-201ENST00000406329 351 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 OOSP1P1-201ENST00000423265 274 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RPS3AP44-201ENST00000425466 790 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 HMGB1P15-201ENST00000453854 435 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms