Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIR5694-201ENST00000581190 76 ntBASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 HSPE1P7-201ENST00000604681 321 ntBASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC034102.8-201ENST00000615146 484 ntBASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL160394.1-201ENST00000624765 724 ntBASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TCRBV4S1A1TA0A5B7 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 Z99496.1-201ENST00000469424 1477 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC104454.1-201ENST00000421341 1401 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNORA51.11-201ENST00000384442 131 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNORA11.4-201ENST00000408823 129 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RNU6-712P-201ENST00000410558 100 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC090096.1-201ENST00000489168 390 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 PRELID3BP4-201ENST00000515476 571 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNRPGP18-201ENST00000553000 214 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 U73023.1-201ENST00000603134 700 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 DPRXP5-201ENST00000604662 539 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL121917.1-203ENST00000605534 577 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC006329.2-201ENST00000611491 394 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL138880.2-201ENST00000616214 239 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MIR6132-201ENST00000622083 109 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL359757.2-201ENST00000624309 274 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL109659.3-201ENST00000624985 950 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC110994.2-201ENST00000635481 492 ntBASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.77□□□□□ -2.13
TCRBV4S1A1TA0A5B7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC135776.4-201ENST00000624300 1904 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RNA5SP37-201ENST00000365420 130 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNORA51.12-201ENST00000384448 134 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SNORA1.3-201ENST00000384676 136 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MIR221-201ENST00000385135 110 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MIR493-201ENST00000385254 89 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 OR51A3P-201ENST00000413596 924 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL137014.1-201ENST00000420490 1226 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SETP11-201ENST00000473027 690 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC079804.2-201ENST00000490376 200 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 GTF2IP9-201ENST00000502460 301 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MTND3P24-201ENST00000506306 329 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC104090.1-201ENST00000506341 1171 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 CBX3P3-201ENST00000508108 532 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 HMGB3P3-201ENST00000510526 400 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 IGKV3-31-201ENST00000523109 329 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RANP3-201ENST00000530970 276 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC103810.1-201ENST00000579873 453 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC008739.2-201ENST00000597006 317 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC079610.2-201ENST00000604818 690 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC013562.2-201ENST00000611632 603 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MTND2P41-201ENST00000637599 773 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 Z82209.1-201ENST00000422141 2135 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 AC099654.7-201ENST00000635788 2127 ntBASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TCRBV4S1A1TA0A5B7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RNU6-1074P-201ENST00000383995 104 ntBASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RNU6-1151P-201ENST00000384684 107 ntBASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 MIR504-201ENST00000385065 83 ntBASIC1.75□□□□□ -2.13
TCRBV4S1A1TA0A5B7 RNU6-821P-201ENST00000390995 107 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms